Källkodspaket: ariba (2.13.3+ds-1)
Länkar för ariba
Debianresurser:
Ansvariga:
Externa resurser:
Följande binärpaket byggs från detta källkodspaket:
- ariba
- Antibiotic Resistance Identification By Assembly
Andra paket besläktade med ariba
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- arkitekturoberoende bygg-beroende
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-
- adep:
debhelper
(>= 11)
- helper programs for debian/rules
-
- adep:
python3-biopython
- Python library for bioinformatics (implemented in Python 3)
-
- adep:
python3-dev
- header files and a static library for Python (default)
-
- adep:
python3-dendropy
- DendroPy Phylogenetic Computing Library (Python 3)
-
- adep:
python3-setuptools
- Python3 Distutils Enhancements
-
- adep:
python3-pymummer
(>= 0.10.2)
- Python 3 interface to MUMmer
-
- adep:
python3-pysam
(>= 0.9.1)
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
-
- adep:
python3-nose
(>= 1.3)
- test discovery and running for Python3 unittest
-
- adep:
python3-bs4
- error-tolerant HTML parser for Python 3
-
- adep:
python3-matplotlib
- Python based plotting system in a style similar to Matlab (Python 3)
-
- adep:
python3-tk
- Tkinter - Writing Tk applications with Python 3.x
-
- adep:
bowtie2
(>= 2.1.0)
- ultrafast memory-efficient short read aligner
-
- adep:
cd-hit
- suite of programs designed to quickly group sequences
-
- adep:
mash
- fast genome and metagenome distance estimation using MinHash
-
- adep:
libminimap-dev
- development headers for libminimap
-
- adep:
libfml-dev
(>= 0.1-4~)
- development headers for libfml
-
- adep:
mummer
- Efficient sequence alignment of full genomes
-
- adep:
fastaq
(>= 3.12.0)
- FASTA and FASTQ file manipulation tools
-
- adep:
help2man
- Automatic manpage generator
-
- adep:
asciidoctor
- AsciiDoc to HTML rendering for Ruby
