Paket: sumaclust (1.0.36+ds-2 och andra)

Länkar för sumaclust

Debianresurser:

Hämta källkodspaketet sumaclust:

Ansvariga:

Debian Med Packaging Team (QA-sida, E-postarkiv)
Tim Booth (QA-sida)
Andreas Tille (QA-sida)
Pierre Gruet (QA-sida)

Externa resurser:

Hemsida [metabarcoding.org]

Liknande paket:

fast and exact clustering of genomic sequences

With the development of next-generation sequencing, efficient tools are needed to handle millions of sequences in reasonable amounts of time. Sumaclust is a program developed by the LECA. Sumaclust aims to cluster sequences in a way that is fast and exact at the same time. This tool has been developed to be adapted to the type of data generated by DNA metabarcoding, i.e. entirely sequenced, short markers. Sumaclust clusters sequences using the same clustering algorithm as UCLUST and CD- HIT. This algorithm is mainly useful to detect the 'erroneous' sequences created during amplification and sequencing protocols, deriving from 'true' sequences.

Andra paket besläktade med sumaclust

beror

rekommenderar

föreslår

enhances

dep: libc6 (>= 2.34)

GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
dep: libgomp1 (>= 6)

GCC OpenMP (GOMP) support library
dep: libsuma1 (>= 1.0.35)

shared library for sumatra and sumaclust

Hämta sumaclust

Hämtningar för alla tillgängliga arkitekturer
Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
riscv64	1.0.36+ds-2+b1	100,4 kbyte	156,0 kbyte	[filförteckning]