Paket: qcat (1.1.0-6)

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Hemsida [github.com]

Liknande paket:

demultiplexing Oxford Nanopore reads from FASTQ files

Qcat is a command-line tool for demultiplexing Oxford Nanopore reads from FASTQ files. It accepts basecalled FASTQ files and splits the reads into separate FASTQ files based on their barcode. Qcat makes the demultiplexing algorithms used in albacore/guppy and EPI2ME available to be used locally with FASTQ files. Currently qcat implements the EPI2ME algorithm.

Andra paket besläktade med qcat

beror

rekommenderar

föreslår

enhances

dep: python3

interactive high-level object-oriented language (default python3 version)
dep: python3-biopython

Python3 library for bioinformatics
dep: python3-parasail

Python3 bindings for the parasail C library
dep: python3-six

Python 2 and 3 compatibility library
dep: python3-yaml

YAML parser and emitter for Python3

sug: qcat-examples

demultiplexing Oxford Nanopore reads from FASTQ files (examples)

Hämta qcat

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Arkitektur	Paketstorlek	Installerad storlek	Filer
all	30,5 kbyte	269,0 kbyte	[filförteckning]