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/usr/bin/evol
/usr/bin/prody
/usr/lib/python3/dist-packages/ProDy-2.4.1.egg-info/PKG-INFO
/usr/lib/python3/dist-packages/ProDy-2.4.1.egg-info/dependency_links.txt
/usr/lib/python3/dist-packages/ProDy-2.4.1.egg-info/entry_points.txt
/usr/lib/python3/dist-packages/ProDy-2.4.1.egg-info/requires.txt
/usr/lib/python3/dist-packages/ProDy-2.4.1.egg-info/top_level.txt
/usr/lib/python3/dist-packages/prody/__init__.py
/usr/lib/python3/dist-packages/prody/apps/__init__.py
/usr/lib/python3/dist-packages/prody/apps/apptools.py
/usr/lib/python3/dist-packages/prody/apps/evol_apps/__init__.py
/usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_coevol.py
/usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_conserv.py
/usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_fetch.py
/usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_filter.py
/usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_merge.py
/usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_occupancy.py
/usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_rankorder.py
/usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_refine.py
/usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_search.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/__init__.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/nmaoptions.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_align.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_anm.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_biomol.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_blast.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_catdcd.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_clustenm.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_contacts.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_eda.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_energy.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_fetch.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_gnm.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_pca.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_select.py
/usr/lib/python3/dist-packages/prody/atomic/__init__.py
/usr/lib/python3/dist-packages/prody/atomic/acceptor.py
/usr/lib/python3/dist-packages/prody/atomic/angle.py
/usr/lib/python3/dist-packages/prody/atomic/atom.py
/usr/lib/python3/dist-packages/prody/atomic/atomgroup.py
/usr/lib/python3/dist-packages/prody/atomic/atomic.py
/usr/lib/python3/dist-packages/prody/atomic/atommap.py
/usr/lib/python3/dist-packages/prody/atomic/bond.py
/usr/lib/python3/dist-packages/prody/atomic/chain.py
/usr/lib/python3/dist-packages/prody/atomic/crossterm.py
/usr/lib/python3/dist-packages/prody/atomic/dihedral.py
/usr/lib/python3/dist-packages/prody/atomic/donor.py
/usr/lib/python3/dist-packages/prody/atomic/fields.py
/usr/lib/python3/dist-packages/prody/atomic/flags.py
/usr/lib/python3/dist-packages/prody/atomic/functions.py
/usr/lib/python3/dist-packages/prody/atomic/hierview.py
/usr/lib/python3/dist-packages/prody/atomic/improper.py
/usr/lib/python3/dist-packages/prody/atomic/nbexclusion.py
/usr/lib/python3/dist-packages/prody/atomic/pointer.py
/usr/lib/python3/dist-packages/prody/atomic/residue.py
/usr/lib/python3/dist-packages/prody/atomic/segment.py
/usr/lib/python3/dist-packages/prody/atomic/select.py
/usr/lib/python3/dist-packages/prody/atomic/selection.py
/usr/lib/python3/dist-packages/prody/atomic/subset.py
/usr/lib/python3/dist-packages/prody/chromatin/__init__.py
/usr/lib/python3/dist-packages/prody/chromatin/cluster.py
/usr/lib/python3/dist-packages/prody/chromatin/functions.py
/usr/lib/python3/dist-packages/prody/chromatin/hic.py
/usr/lib/python3/dist-packages/prody/chromatin/norm.py
/usr/lib/python3/dist-packages/prody/chromatin/straw.py
/usr/lib/python3/dist-packages/prody/compounds/__init__.py
/usr/lib/python3/dist-packages/prody/compounds/bird.py
/usr/lib/python3/dist-packages/prody/compounds/ccd.py
/usr/lib/python3/dist-packages/prody/compounds/functions.py
/usr/lib/python3/dist-packages/prody/compounds/pdbligands.py
/usr/lib/python3/dist-packages/prody/database/__init__.py
/usr/lib/python3/dist-packages/prody/database/cath.py
/usr/lib/python3/dist-packages/prody/database/dali.py
/usr/lib/python3/dist-packages/prody/database/goa.py
/usr/lib/python3/dist-packages/prody/database/pfam.py
/usr/lib/python3/dist-packages/prody/database/quartataweb.py
/usr/lib/python3/dist-packages/prody/database/uniprot.py
/usr/lib/python3/dist-packages/prody/domain_decomposition/__init__.py
/usr/lib/python3/dist-packages/prody/domain_decomposition/spectrus.py
/usr/lib/python3/dist-packages/prody/dynamics/__init__.py
/usr/lib/python3/dist-packages/prody/dynamics/adaptive.py
/usr/lib/python3/dist-packages/prody/dynamics/analysis.py
/usr/lib/python3/dist-packages/prody/dynamics/anm.py
/usr/lib/python3/dist-packages/prody/dynamics/bbenm.py
/usr/lib/python3/dist-packages/prody/dynamics/bildfile.py
/usr/lib/python3/dist-packages/prody/dynamics/clustenm.py
/usr/lib/python3/dist-packages/prody/dynamics/compare.py
/usr/lib/python3/dist-packages/prody/dynamics/editing.py
/usr/lib/python3/dist-packages/prody/dynamics/entropy.py
/usr/lib/python3/dist-packages/prody/dynamics/essa.py
/usr/lib/python3/dist-packages/prody/dynamics/exanm.py
/usr/lib/python3/dist-packages/prody/dynamics/exgnm.py
/usr/lib/python3/dist-packages/prody/dynamics/functions.py
/usr/lib/python3/dist-packages/prody/dynamics/gamma.py
/usr/lib/python3/dist-packages/prody/dynamics/gnm.py
/usr/lib/python3/dist-packages/prody/dynamics/heatmapper.py
/usr/lib/python3/dist-packages/prody/dynamics/imanm.py
/usr/lib/python3/dist-packages/prody/dynamics/mechstiff.py
/usr/lib/python3/dist-packages/prody/dynamics/mode.py
/usr/lib/python3/dist-packages/prody/dynamics/modeset.py
/usr/lib/python3/dist-packages/prody/dynamics/nma.py
/usr/lib/python3/dist-packages/prody/dynamics/nmdfile.py
/usr/lib/python3/dist-packages/prody/dynamics/pca.py
/usr/lib/python3/dist-packages/prody/dynamics/perturb.py
/usr/lib/python3/dist-packages/prody/dynamics/plotting.py
/usr/lib/python3/dist-packages/prody/dynamics/rtb.py
/usr/lib/python3/dist-packages/prody/dynamics/rtbtools.cpython-311-riscv64-linux-gnu.so
/usr/lib/python3/dist-packages/prody/dynamics/rtbtools.cpython-312-riscv64-linux-gnu.so
/usr/lib/python3/dist-packages/prody/dynamics/sampling.py
/usr/lib/python3/dist-packages/prody/dynamics/signature.py
/usr/lib/python3/dist-packages/prody/dynamics/smtools.cpython-311-riscv64-linux-gnu.so
/usr/lib/python3/dist-packages/prody/dynamics/smtools.cpython-312-riscv64-linux-gnu.so
/usr/lib/python3/dist-packages/prody/dynamics/vmdfile.py
/usr/lib/python3/dist-packages/prody/ensemble/__init__.py
/usr/lib/python3/dist-packages/prody/ensemble/conformation.py
/usr/lib/python3/dist-packages/prody/ensemble/ensemble.py
/usr/lib/python3/dist-packages/prody/ensemble/functions.py
/usr/lib/python3/dist-packages/prody/ensemble/pdbensemble.py
/usr/lib/python3/dist-packages/prody/kdtree/_CKDTree.cpython-311-riscv64-linux-gnu.so
/usr/lib/python3/dist-packages/prody/kdtree/_CKDTree.cpython-312-riscv64-linux-gnu.so
/usr/lib/python3/dist-packages/prody/kdtree/__init__.py
/usr/lib/python3/dist-packages/prody/kdtree/kdtree.py
/usr/lib/python3/dist-packages/prody/measure/__init__.py
/usr/lib/python3/dist-packages/prody/measure/contacts.py
/usr/lib/python3/dist-packages/prody/measure/measure.py
/usr/lib/python3/dist-packages/prody/measure/transform.py
/usr/lib/python3/dist-packages/prody/proteins/__init__.py
/usr/lib/python3/dist-packages/prody/proteins/blastpdb.py
/usr/lib/python3/dist-packages/prody/proteins/ccealign.cpython-311-riscv64-linux-gnu.so
/usr/lib/python3/dist-packages/prody/proteins/ccealign.cpython-312-riscv64-linux-gnu.so
/usr/lib/python3/dist-packages/prody/proteins/ciffile.py
/usr/lib/python3/dist-packages/prody/proteins/cifheader.py
/usr/lib/python3/dist-packages/prody/proteins/compare.py
/usr/lib/python3/dist-packages/prody/proteins/dssp.py
/usr/lib/python3/dist-packages/prody/proteins/emdfile.py
/usr/lib/python3/dist-packages/prody/proteins/fixer.py
/usr/lib/python3/dist-packages/prody/proteins/functions.py
/usr/lib/python3/dist-packages/prody/proteins/header.py
/usr/lib/python3/dist-packages/prody/proteins/localpdb.py
/usr/lib/python3/dist-packages/prody/proteins/pdbclusters.py
/usr/lib/python3/dist-packages/prody/proteins/pdbfile.py
/usr/lib/python3/dist-packages/prody/proteins/starfile.py
/usr/lib/python3/dist-packages/prody/proteins/stride.py
/usr/lib/python3/dist-packages/prody/proteins/waterbridges.py
/usr/lib/python3/dist-packages/prody/proteins/wwpdb.py
/usr/lib/python3/dist-packages/prody/sequence/__init__.py
/usr/lib/python3/dist-packages/prody/sequence/analysis.py
/usr/lib/python3/dist-packages/prody/sequence/msa.py
/usr/lib/python3/dist-packages/prody/sequence/msafile.py
/usr/lib/python3/dist-packages/prody/sequence/msaio.cpython-311-riscv64-linux-gnu.so
/usr/lib/python3/dist-packages/prody/sequence/msaio.cpython-312-riscv64-linux-gnu.so
/usr/lib/python3/dist-packages/prody/sequence/msatools.cpython-311-riscv64-linux-gnu.so
/usr/lib/python3/dist-packages/prody/sequence/msatools.cpython-312-riscv64-linux-gnu.so
/usr/lib/python3/dist-packages/prody/sequence/plotting.py
/usr/lib/python3/dist-packages/prody/sequence/seqtools.cpython-311-riscv64-linux-gnu.so
/usr/lib/python3/dist-packages/prody/sequence/seqtools.cpython-312-riscv64-linux-gnu.so
/usr/lib/python3/dist-packages/prody/sequence/sequence.py
/usr/lib/python3/dist-packages/prody/trajectory/__init__.py
/usr/lib/python3/dist-packages/prody/trajectory/dcdfile.py
/usr/lib/python3/dist-packages/prody/trajectory/frame.py
/usr/lib/python3/dist-packages/prody/trajectory/psffile.py
/usr/lib/python3/dist-packages/prody/trajectory/trajbase.py
/usr/lib/python3/dist-packages/prody/trajectory/trajectory.py
/usr/lib/python3/dist-packages/prody/trajectory/trajfile.py
/usr/lib/python3/dist-packages/prody/utilities/TreeConstruction.py
/usr/lib/python3/dist-packages/prody/utilities/__init__.py
/usr/lib/python3/dist-packages/prody/utilities/catchall.py
/usr/lib/python3/dist-packages/prody/utilities/checkers.py
/usr/lib/python3/dist-packages/prody/utilities/datafiles/mod_res_map.dat
/usr/lib/python3/dist-packages/prody/utilities/datafiles/saxs_water.dat
/usr/lib/python3/dist-packages/prody/utilities/doctools.py
/usr/lib/python3/dist-packages/prody/utilities/drawtools.py
/usr/lib/python3/dist-packages/prody/utilities/eigtools.py
/usr/lib/python3/dist-packages/prody/utilities/laptools.py
/usr/lib/python3/dist-packages/prody/utilities/legacy.py
/usr/lib/python3/dist-packages/prody/utilities/logger.py
/usr/lib/python3/dist-packages/prody/utilities/misctools.py
/usr/lib/python3/dist-packages/prody/utilities/pathtools.py
/usr/lib/python3/dist-packages/prody/utilities/seqtools.py
/usr/lib/python3/dist-packages/prody/utilities/settings.py
/usr/share/doc/python3-prody/changelog.Debian.gz
/usr/share/doc/python3-prody/copyright
/usr/share/man/man1/evol.1.gz
/usr/share/man/man1/prody.1.gz
/usr/bin/evol
/usr/bin/prody
/usr/lib/python3/dist-packages/ProDy-2.3.1.egg-info/PKG-INFO
/usr/lib/python3/dist-packages/ProDy-2.3.1.egg-info/dependency_links.txt
/usr/lib/python3/dist-packages/ProDy-2.3.1.egg-info/entry_points.txt
/usr/lib/python3/dist-packages/ProDy-2.3.1.egg-info/requires.txt
/usr/lib/python3/dist-packages/ProDy-2.3.1.egg-info/top_level.txt
/usr/lib/python3/dist-packages/prody/__init__.py
/usr/lib/python3/dist-packages/prody/apps/__init__.py
/usr/lib/python3/dist-packages/prody/apps/apptools.py
/usr/lib/python3/dist-packages/prody/apps/evol_apps/__init__.py
/usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_coevol.py
/usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_conserv.py
/usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_fetch.py
/usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_filter.py
/usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_merge.py
/usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_occupancy.py
/usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_rankorder.py
/usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_refine.py
/usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_search.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/__init__.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/nmaoptions.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_align.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_anm.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_biomol.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_blast.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_catdcd.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_contacts.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_eda.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_energy.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_fetch.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_gnm.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_pca.py
/usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_select.py
/usr/lib/python3/dist-packages/prody/atomic/__init__.py
/usr/lib/python3/dist-packages/prody/atomic/acceptor.py
/usr/lib/python3/dist-packages/prody/atomic/angle.py
/usr/lib/python3/dist-packages/prody/atomic/atom.py
/usr/lib/python3/dist-packages/prody/atomic/atomgroup.py
/usr/lib/python3/dist-packages/prody/atomic/atomic.py
/usr/lib/python3/dist-packages/prody/atomic/atommap.py
/usr/lib/python3/dist-packages/prody/atomic/bond.py
/usr/lib/python3/dist-packages/prody/atomic/chain.py
/usr/lib/python3/dist-packages/prody/atomic/crossterm.py
/usr/lib/python3/dist-packages/prody/atomic/dihedral.py
/usr/lib/python3/dist-packages/prody/atomic/donor.py
/usr/lib/python3/dist-packages/prody/atomic/fields.py
/usr/lib/python3/dist-packages/prody/atomic/flags.py
/usr/lib/python3/dist-packages/prody/atomic/functions.py
/usr/lib/python3/dist-packages/prody/atomic/hierview.py
/usr/lib/python3/dist-packages/prody/atomic/improper.py
/usr/lib/python3/dist-packages/prody/atomic/nbexclusion.py
/usr/lib/python3/dist-packages/prody/atomic/pointer.py
/usr/lib/python3/dist-packages/prody/atomic/residue.py
/usr/lib/python3/dist-packages/prody/atomic/segment.py
/usr/lib/python3/dist-packages/prody/atomic/select.py
/usr/lib/python3/dist-packages/prody/atomic/selection.py
/usr/lib/python3/dist-packages/prody/atomic/subset.py
/usr/lib/python3/dist-packages/prody/chromatin/__init__.py
/usr/lib/python3/dist-packages/prody/chromatin/cluster.py
/usr/lib/python3/dist-packages/prody/chromatin/functions.py
/usr/lib/python3/dist-packages/prody/chromatin/hic.py
/usr/lib/python3/dist-packages/prody/chromatin/norm.py
/usr/lib/python3/dist-packages/prody/chromatin/straw.py
/usr/lib/python3/dist-packages/prody/compounds/__init__.py
/usr/lib/python3/dist-packages/prody/compounds/bird.py
/usr/lib/python3/dist-packages/prody/compounds/ccd.py
/usr/lib/python3/dist-packages/prody/compounds/functions.py
/usr/lib/python3/dist-packages/prody/compounds/pdbligands.py
/usr/lib/python3/dist-packages/prody/database/__init__.py
/usr/lib/python3/dist-packages/prody/database/cath.py
/usr/lib/python3/dist-packages/prody/database/dali.py
/usr/lib/python3/dist-packages/prody/database/goa.py
/usr/lib/python3/dist-packages/prody/database/pfam.py
/usr/lib/python3/dist-packages/prody/database/quartataweb.py
/usr/lib/python3/dist-packages/prody/database/uniprot.py
/usr/lib/python3/dist-packages/prody/domain_decomposition/__init__.py
/usr/lib/python3/dist-packages/prody/domain_decomposition/spectrus.py
/usr/lib/python3/dist-packages/prody/dynamics/__init__.py
/usr/lib/python3/dist-packages/prody/dynamics/adaptive.py
/usr/lib/python3/dist-packages/prody/dynamics/analysis.py
/usr/lib/python3/dist-packages/prody/dynamics/anm.py
/usr/lib/python3/dist-packages/prody/dynamics/bbenm.py
/usr/lib/python3/dist-packages/prody/dynamics/clustenm.py
/usr/lib/python3/dist-packages/prody/dynamics/compare.py
/usr/lib/python3/dist-packages/prody/dynamics/editing.py
/usr/lib/python3/dist-packages/prody/dynamics/entropy.py
/usr/lib/python3/dist-packages/prody/dynamics/essa.py
/usr/lib/python3/dist-packages/prody/dynamics/exanm.py
/usr/lib/python3/dist-packages/prody/dynamics/exgnm.py
/usr/lib/python3/dist-packages/prody/dynamics/functions.py
/usr/lib/python3/dist-packages/prody/dynamics/gamma.py
/usr/lib/python3/dist-packages/prody/dynamics/gnm.py
/usr/lib/python3/dist-packages/prody/dynamics/heatmapper.py
/usr/lib/python3/dist-packages/prody/dynamics/imanm.py
/usr/lib/python3/dist-packages/prody/dynamics/mechstiff.py
/usr/lib/python3/dist-packages/prody/dynamics/mode.py
/usr/lib/python3/dist-packages/prody/dynamics/modeset.py
/usr/lib/python3/dist-packages/prody/dynamics/nma.py
/usr/lib/python3/dist-packages/prody/dynamics/nmdfile.py
/usr/lib/python3/dist-packages/prody/dynamics/pca.py
/usr/lib/python3/dist-packages/prody/dynamics/perturb.py
/usr/lib/python3/dist-packages/prody/dynamics/plotting.py
/usr/lib/python3/dist-packages/prody/dynamics/rtb.py
/usr/lib/python3/dist-packages/prody/dynamics/rtbtools.cpython-311-riscv64-linux-gnu.so
/usr/lib/python3/dist-packages/prody/dynamics/sampling.py
/usr/lib/python3/dist-packages/prody/dynamics/signature.py
/usr/lib/python3/dist-packages/prody/dynamics/smtools.cpython-311-riscv64-linux-gnu.so
/usr/lib/python3/dist-packages/prody/dynamics/vmdfile.py
/usr/lib/python3/dist-packages/prody/ensemble/__init__.py
/usr/lib/python3/dist-packages/prody/ensemble/conformation.py
/usr/lib/python3/dist-packages/prody/ensemble/ensemble.py
/usr/lib/python3/dist-packages/prody/ensemble/functions.py
/usr/lib/python3/dist-packages/prody/ensemble/pdbensemble.py
/usr/lib/python3/dist-packages/prody/kdtree/_CKDTree.cpython-311-riscv64-linux-gnu.so
/usr/lib/python3/dist-packages/prody/kdtree/__init__.py
/usr/lib/python3/dist-packages/prody/kdtree/kdtree.py
/usr/lib/python3/dist-packages/prody/measure/__init__.py
/usr/lib/python3/dist-packages/prody/measure/contacts.py
/usr/lib/python3/dist-packages/prody/measure/measure.py
/usr/lib/python3/dist-packages/prody/measure/transform.py
/usr/lib/python3/dist-packages/prody/proteins/__init__.py
/usr/lib/python3/dist-packages/prody/proteins/blastpdb.py
/usr/lib/python3/dist-packages/prody/proteins/ccealign.cpython-311-riscv64-linux-gnu.so
/usr/lib/python3/dist-packages/prody/proteins/ciffile.py
/usr/lib/python3/dist-packages/prody/proteins/cifheader.py
/usr/lib/python3/dist-packages/prody/proteins/compare.py
/usr/lib/python3/dist-packages/prody/proteins/dssp.py
/usr/lib/python3/dist-packages/prody/proteins/emdfile.py
/usr/lib/python3/dist-packages/prody/proteins/functions.py
/usr/lib/python3/dist-packages/prody/proteins/header.py
/usr/lib/python3/dist-packages/prody/proteins/localpdb.py
/usr/lib/python3/dist-packages/prody/proteins/pdbclusters.py
/usr/lib/python3/dist-packages/prody/proteins/pdbfile.py
/usr/lib/python3/dist-packages/prody/proteins/starfile.py
/usr/lib/python3/dist-packages/prody/proteins/stride.py
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