Paket: libbifrost-dev (1.3.1-1)

Länkar för libbifrost-dev

Debianresurser:

Hämta källkodspaketet bifrost:

Ansvariga:

Externa resurser:

Hemsida [github.com]

Liknande paket:

static library and header files for libbifrost

Libbifrost-dev is the development library for the command-line tool bifrost for sequencing that features a broad range of functions, such as indexing, editing, and querying the graph, and includes a graph coloring method that maps each k-mer of the graph to the genomes it occurs in.

 * Build, index, color and query the compacted de Bruijn graph
 * No need to build the uncompacted de Bruijn graph
 * Reads or assembled genomes as input
 * Output graph in GFA (can be visualized with Bandage), FASTA or binary
 * Graph cleaning: short tip clipping, etc.
 * Multi-threaded
 * No parameters to estimate with other tools
 * Exact or approximate k-mer search of queries

Andra paket besläktade med libbifrost-dev

beror

rekommenderar

föreslår

enhances

dep: libbifrost0 (= 1.3.1-1)

library for parallel construction, indexing and querying of de Bruijn graphs

Hämta libbifrost-dev

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Arkitektur	Paketstorlek	Installerad storlek	Filer
riscv64	1.790,5 kbyte	18.705,0 kbyte	[filförteckning]