Paket: python3-vcf (0.6.8+git20170215.476169c-10)

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Variant Call Format (VCF) parser for Python 3

The Variant Call Format (VCF) specifies the format of a text file used in bioinformatics for storing gene sequence variations. The format has been developed with the advent of large-scale genotyping and DNA sequencing projects, such as the 1000 Genomes Project.

The intent of this module is to mimic the ``csv`` module in the Python stdlib, as opposed to more flexible serialization formats like JSON or YAML. ``vcf`` will attempt to parse the content of each record based on the data types specified in the meta-information lines -- specifically the ##INFO and ##FORMAT lines. If these lines are missing or incomplete, it will check against the reserved types mentioned in the spec. Failing that, it will just return strings.

This package provides the Python 3 modules.

Andra paket besläktade med python3-vcf

beror

rekommenderar

föreslår

enhances

dep: libc6 (>= 2.4)

GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
dep: python3

interactive high-level object-oriented language (default python3 version)

dep: python3 (<< 3.13)

dep: python3 (>= 3.11~)
dep: python3-pkg-resources

Package Discovery and Resource Access using pkg_resources
dep: python3-pysam

interface for the SAM/BAM sequence alignment and mapping format (Python 3)

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Arkitektur	Paketstorlek	Installerad storlek	Filer
i386	55,5 kbyte	210,0 kbyte	[filförteckning]