Paket: bedtools (2.31.1+dfsg-2)

Länkar för bedtools

Debianresurser:

Hämta källkodspaketet bedtools:

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Debian Med Packaging Team (QA-sida, E-postarkiv)
Charles Plessy (QA-sida)
Andreas Tille (QA-sida)
Étienne Mollier (QA-sida)

Externa resurser:

Hemsida [github.com]

Liknande paket:

suite of utilities for comparing genomic features

The BEDTools utilities allow one to address common genomics tasks such as finding feature overlaps and computing coverage. The utilities are largely based on four widely-used file formats: BED, GFF/GTF, VCF, and SAM/BAM. Using BEDTools, one can develop sophisticated pipelines that answer complicated research questions by streaming several BEDTools together.

The groupBy utility is distributed in the filo package.

Märken: Field: Biologi, Bioinformatics, Implemented in: implemented-in::c++, interface::commandline, Role: Program, Scope: Suite, Purpose: use::analysing, use::comparing, Data Conversion, use::filtering, works-with::biological-sequence

Andra paket besläktade med bedtools

beror

rekommenderar

föreslår

enhances

dep: libbz2-1.0

high-quality block-sorting file compressor library - runtime
dep: libc6 (>= 2.34)

GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
dep: libgcc-s1 (>= 3.5)

GCC stödbibliotek
dep: liblzma5 (>= 5.1.1alpha+20120614)

XZ-format compression library
dep: libstdc++6 (>= 13.1)

GNU standardbibliotek v3 för C++
dep: zlib1g (>= 1:1.1.4)

Kompressionsbibliotek - körtidspaket

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Arkitektur	Paketstorlek	Installerad storlek	Filer
armel	547,2 kbyte	1.817,0 kbyte	[filförteckning]