Paket: r-bioc-bitseq (1.26.1+dfsg-1)

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transcript expression inference and analysis for RNA-seq data

The BitSeq package is targeted for transcript expression analysis and differential expression analysis of RNA-seq data in two stage process. In the first stage it uses Bayesian inference methodology to infer expression of individual transcripts from individual RNA-seq experiments. The second stage of BitSeq embraces the differential expression analysis of transcript expression. Providing expression estimates from replicates of multiple conditions, Log-Normal model of the estimates is used for inferring the condition mean transcript expression and ranking the transcripts based on the likelihood of differential expression.

Andra paket besläktade med r-bioc-bitseq

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rekommenderar

föreslår

enhances

dep: libc6 (>= 2.23)

GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
dep: libgcc1 (>= 1:3.0) [amd64, i386]

GCC stödbibliotek

dep: libgcc1 (>= 1:3.5) [armhf]

dep: libgcc1 (>= 1:4.2) [arm64]
dep: libgomp1 (>= 4.9)

GCC OpenMP (GOMP) support library
dep: libstdc++6 (>= 5.2)

GNU standardbibliotek v3 för C++
dep: r-api-3.5

virtuellt paket som tillhandahålls av r-base-core
dep: r-api-bioc-3.8

virtuellt paket som tillhandahålls av r-bioc-biocgenerics
dep: r-base-core (>= 3.5.2-1)

GNU R core of statistical computation and graphics system
dep: r-bioc-iranges

GNU R low-level containers for storing sets of integer ranges
dep: r-bioc-rsamtools

GNU R binary alignment (BAM), variant call (BCF), or tabix file import
dep: r-bioc-s4vectors

BioConductor S4 implementation of vectors and lists
dep: r-bioc-zlibbioc

(Virtual) zlibbioc Bioconductor package
dep: zlib1g (>= 1:1.2.3.3)

Kompressionsbibliotek - körtidspaket

Hämta r-bioc-bitseq

Hämtningar för alla tillgängliga arkitekturer
Arkitektur	Paketstorlek	Installerad storlek	Filer
amd64	961,6 kbyte	5.620,0 kbyte	[filförteckning]
arm64	933,3 kbyte	5.552,0 kbyte	[filförteckning]
armhf	927,6 kbyte	5.369,0 kbyte	[filförteckning]
i386	982,0 kbyte	5.668,0 kbyte	[filförteckning]