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[ Källkod: pbalign ]
Paket: pbalign (0.3.2-1)
Länkar för pbalign
Debianresurser:
Hämta källkodspaketet pbalign:
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Externa resurser:
- Hemsida [github.com]
Liknande paket:
map Pacific Biosciences reads to reference DNA sequences
pbalign aligns PacBio reads to reference sequences, filters aligned reads according to user-specific filtering criteria, and converts the output to either the SAM format or PacBio Compare HDF5 (e.g., .cmp.h5) format.
This package is part of the SMRTAnalysis suite.
Andra paket besläktade med pbalign
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- dep: blasr (>= 5.3+0)
- mapping single-molecule sequencing reads
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- dep: python
- interactive high-level object-oriented language (Python2 version)
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- dep: python-pbalign (= 0.3.2-1)
- map Pacific Biosciences reads to reference DNA sequences (Python2)
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- dep: python-pkg-resources
- Package Discovery and Resource Access using pkg_resources
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- rec: hdf5-tools
- Hierarchical Data Format 5 (HDF5) - Runtime tools
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- rec: python-pbh5tools
- tools for manipulating Pacific Biosciences HDF5 files -- Python 2 library
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- sug: bowtie2
- ultrafast memory-efficient short read aligner
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- sug: gmap
- spliced and SNP-tolerant alignment for mRNA and short reads
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- sug: pbalign-doc
- documentation for pbalign
Hämta pbalign
| Arkitektur | Paketstorlek | Installerad storlek | Filer |
|---|---|---|---|
| all | 9,3 kbyte | 44,0 kbyte | [filförteckning] |