Paket: q2-quality-control (2020.11.1-3)
Länkar för q2-quality-control
Debianresurser:
Hämta källkodspaketet q2-quality-control:
- [q2-quality-control_2020.11.1-3.dsc]
- [q2-quality-control_2020.11.1.orig.tar.xz]
- [q2-quality-control_2020.11.1-3.debian.tar.xz]
Ansvariga:
- Debian Med Packaging Team (QA-sida, E-postarkiv)
- Liubov Chuprikova (QA-sida)
- Steffen Moeller (QA-sida)
- Étienne Mollier (QA-sida)
Externa resurser:
- Hemsida [qiime2.org]
Liknande paket:
QIIME 2 plugin for quality assurance of feature and sequence data
QIIME 2 is a powerful, extensible, and decentralized microbiome analysis package with a focus on data and analysis transparency. QIIME 2 enables researchers to start an analysis with raw DNA sequence data and finish with publication-quality figures and statistical results. Key features:
* Integrated and automatic tracking of data provenance * Semantic type system * Plugin system for extending microbiome analysis functionality * Support for multiple types of user interfaces (e.g. API, command line,graphical)
QIIME 2 is a complete redesign and rewrite of the QIIME 1 microbiome analysis pipeline. QIIME 2 will address many of the limitations of QIIME 1, while retaining the features that makes QIIME 1 a powerful and widely-used analysis pipeline.
QIIME 2 currently supports an initial end-to-end microbiome analysis pipeline. New functionality will regularly become available through QIIME 2 plugins. You can view a list of plugins that are currently available on the QIIME 2 plugin availability page. The future plugins page lists plugins that are being developed.
Andra paket besläktade med q2-quality-control
|
|
|
|
-
- dep: bowtie2
- ultrafast memory-efficient short read aligner
-
- dep: ncbi-blast+
- next generation suite of BLAST sequence search tools
-
- dep: python3
- interactive high-level object-oriented language (default python3 version)
-
- dep: python3-biom-format
- Biological Observation Matrix (BIOM) format (Python 3)
-
- dep: python3-h5py
- general-purpose Python interface to hdf5
-
- dep: python3-numpy
- Fast array facility to the Python 3 language
-
- dep: python3-pandas
- data structures for "relational" or "labeled" data
-
- dep: python3-scipy
- scientific tools for Python 3
-
- dep: python3-seaborn
- statistical visualization library for Python3
-
- dep: q2-taxa
- QIIME 2 plugin for working with feature taxonomy annotations
-
- dep: q2templates
- Design template package for QIIME 2 Plugins
-
- dep: qiime
- Quantitative Insights Into Microbial Ecology
-
- dep: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
-
- dep: vsearch
- tool for processing metagenomic sequences
Hämta q2-quality-control
| Arkitektur | Paketstorlek | Installerad storlek | Filer |
|---|---|---|---|
| all | 241,9 kbyte | 457,0 kbyte | [filförteckning] |