Paket: libseqlib-dev (1.2.0+dfsg-4)
Länkar för libseqlib-dev
Debianresurser:
Hämta källkodspaketet libseqlib:
- [libseqlib_1.2.0+dfsg-4.dsc]
- [libseqlib_1.2.0+dfsg.orig.tar.xz]
- [libseqlib_1.2.0+dfsg-4.debian.tar.xz]
Ansvariga:
Externa resurser:
- Hemsida [github.com]
Liknande paket:
C++ htslib/bwa-mem/fermi interface for interrogating sequence data (dev)
C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment.
This package contains the header files and static library.
Andra paket besläktade med libseqlib-dev
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- dep: libbwa-dev
- Burrows-Wheeler Aligner source files
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- dep: libfml-dev
- development headers for libfml
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- dep: libhts-dev
- development files for the HTSlib
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- dep: libjsoncpp-dev
- library for reading and writing JSON for C++ (devel files)
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- dep: libseqlib2 (= 1.2.0+dfsg-4)
- C++ htslib/bwa-mem/fermi interface for interrogating sequence data
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- dep: libssw-dev
- Development headers and static libraries for libssw
också ett virtuellt paket som tillhandahålls av libssw-dev
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- dep: zlib1g-dev
- compression library - development
Hämta libseqlib-dev
| Arkitektur | Paketstorlek | Installerad storlek | Filer |
|---|---|---|---|
| amd64 | 206,2 kbyte | 1.203,0 kbyte | [filförteckning] |
| arm64 | 199,5 kbyte | 1.193,0 kbyte | [filförteckning] |
| armel | 201,1 kbyte | 1.115,0 kbyte | [filförteckning] |
| armhf | 204,4 kbyte | 1.015,0 kbyte | [filförteckning] |
| i386 | 219,9 kbyte | 1.034,0 kbyte | [filförteckning] |
| mips64el | 223,7 kbyte | 1.438,0 kbyte | [filförteckning] |
| mipsel | 221,4 kbyte | 1.115,0 kbyte | [filförteckning] |
| ppc64el | 219,6 kbyte | 1.310,0 kbyte | [filförteckning] |
| s390x | 190,7 kbyte | 1.211,0 kbyte | [filförteckning] |