Paket: snpsift (5.1+dfsg2-2)

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Externa resurser:

Hemsida [pcingola.github.io]

Liknande paket:

tool to annotate and manipulate genome variants - tool

SnpSift is a toolbox that allows one to filter and manipulate annotated files. Once the genomic variants have been annotated, one needs to filter them out in order to find the "interesting / relevant variants". Given the large data files, this is not a trivial task (e.g. one cannot load all the variants into XLS spreadsheet). SnpSift helps to perform this VCF file manipulation and filtering required at this stage in data processing pipelines.

This package contains the command line tool.

Andra paket besläktade med snpsift

beror

rekommenderar

föreslår

enhances

dep: default-jre

Standard Java or Java compatible Runtime
dep: libsnpsift-java (= 5.1+dfsg2-2)

tool to annotate and manipulate genome variants - lib

sug: snpeff

genetic variant annotation and effect prediction toolbox - tool

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Arkitektur	Paketstorlek	Installerad storlek	Filer
all	4,3 kbyte	15,0 kbyte	[filförteckning]