Balík: r-cran-ape (5.7-1)
Odkazy pre r-cran-ape
Zdroje Debian:
Stiahnuť zdrojový balík r-cran-ape:
Správcovia:
Externé zdroje:
- Domovská stránka [cran.r-project.org]
Podobné balíky:
GNU R package for Analyses of Phylogenetics and Evolution
This package provides functions for reading, writing, plotting, and manipulating phylogenetic trees, analyses of comparative data in a phylogenetic framework, ancestral character analyses, analyses of diversification and macroevolution, computing distances from DNA sequences, reading and writing nucleotide sequences as well as importing from BioConductor, and several tools such as Mantel's test, generalized skyline plots, graphical exploration of phylogenetic data (alex, trex, kronoviz), estimation of absolute evolutionary rates and clock-like trees using mean path lengths and penalized likelihood, dating trees with non-contemporaneous sequences, translating DNA into AA sequences, and assessing sequence alignments. Phylogeny estimation can be done with the NJ, BIONJ, ME, MVR, SDM, and triangle methods, and several methods handling incomplete distance matrices (NJ*, BIONJ*, MVR*, and the corresponding triangle method). Some functions call external applications (PhyML, Clustal, T-Coffee, Muscle) whose results are returned into R.
Ostatné balíky súvisiace s balíkom r-cran-ape
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- dep: libc6 (>= 2.29)
- knižnica GNU C - zdieľané knižnice
tiež virtuálny balík poskytovaný balíkom libc6-udeb
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- dep: libgcc-s1 (>= 3.0) [nie armel, armhf]
- podporná knižnica GCC
- dep: libgcc-s1 (>= 3.5) [armel, armhf]
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- dep: liblapack3
- knižnica rutín lineárnej algebry, verzia 3 - zdieľaná knižnica
- alebo liblapack.so.3
- virtuálny balík poskytovaný balíkom libatlas3-base, liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
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- dep: libstdc++6 (>= 11)
- štandardná knižnica C++ GNU v3
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- dep: r-api-4.0
- virtuálny balík poskytovaný balíkom r-base-core
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- dep: r-base-core (>= 4.2.2.20221110-2)
- jadro GNU R na štatistické výpočty a grafický systém
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- dep: r-cran-digest
- GNU R package for 'hash digest' of R data structures
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- dep: r-cran-lattice
- balík GNU R pre grafiku „Trellis“
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- dep: r-cran-nlme
- balík GNU R na (ne-)lineárne modely zmiešaných efektov
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- dep: r-cran-rcpp (>= 0.12.0)
- balík GNU R na hladkú integráciu R a C++
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- rec: r-cran-phangorn
- GNU R package for phylogenetic analysis
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- sug: clustalw
- globálne viacnásobné zarovnávanie sekvencií nukleotidov alebo peptidov
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- sug: muscle
- Multiple alignment program of protein sequences
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- sug: phyml
- Phylogenetic estimation using Maximum Likelihood
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- sug: r-cran-expm
- GNU R Computation of the matrix exponential and related quantities
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- sug: r-cran-gee
- Generalized Estimation Equation Solver
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- sug: r-cran-igraph
- GNU R network analysis and visualization
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- sug: t-coffee
- Multiple Sequence Alignment
Stiahnuť r-cran-ape
| Architektúra | Veľkosť balíka | Nainštalovaná veľkosť | Súbory |
|---|---|---|---|
| amd64 | 2,816.0 kB | 3,661.0 kB | [zoznam súborov] |
| arm64 | 2,801.1 kB | 3,649.0 kB | [zoznam súborov] |
| armel | 2,795.2 kB | 3,627.0 kB | [zoznam súborov] |
| armhf | 2,796.5 kB | 3,551.0 kB | [zoznam súborov] |
| i386 | 2,828.4 kB | 3,705.0 kB | [zoznam súborov] |
| mips64el | 2,807.8 kB | 3,728.0 kB | [zoznam súborov] |
| mipsel | 2,805.9 kB | 3,721.0 kB | [zoznam súborov] |
| ppc64el | 2,824.0 kB | 3,777.0 kB | [zoznam súborov] |
| s390x | 2,809.5 kB | 3,677.0 kB | [zoznam súborov] |