Balík: r-bioc-monocle (2.26.0-2)

Odkazy pre r-bioc-monocle

Zdroje Debian:

Stiahnuť zdrojový balík r-bioc-monocle:

Správcovia:

Externé zdroje:

Domovská stránka [bioconductor.org]

Podobné balíky:

clustering, differential expression, and trajectory analysis for RNA-Seq

Monocle performs differential expression and time-series analysis for single-cell expression experiments. It orders individual cells according to progress through a biological process, without knowing ahead of time which genes define progress through that process. Monocle also performs differential expression analysis, clustering, visualization, and other useful tasks on single cell expression data. It is designed to work with RNA-Seq and qPCR data, but could be used with other types as well.

Ostatné balíky súvisiace s balíkom r-bioc-monocle

závisí

odporúča

navrhuje

vylepšuje

dep: libc6 (>= 2.4)

knižnica GNU C - zdieľané knižnice
tiež virtuálny balík poskytovaný balíkom libc6-udeb
dep: libgcc-s1 (>= 3.0)

podporná knižnica GCC
dep: libstdc++6 (>= 11)

štandardná knižnica C++ GNU v3
dep: r-api-4.0

virtuálny balík poskytovaný balíkom r-base-core
dep: r-api-bioc-3.16

virtuálny balík poskytovaný balíkom r-bioc-biocgenerics
dep: r-base-core (>= 4.2.2.20221110-1)

jadro GNU R na štatistické výpočty a grafický systém
dep: r-bioc-biobase

base functions for Bioconductor
dep: r-bioc-biocgenerics

generic functions for Bioconductor
dep: r-bioc-biocviews

Categorized views of R package repositories
dep: r-bioc-hsmmsinglecell (>= 0.101.5)

Single-cell RNA-Seq for differentiating human skeletal muscle myoblasts
dep: r-bioc-limma

linear models for microarray data
dep: r-cran-cluster

balík GNU R na klastrovú analýzu, ktorý napísali Rousseeuw et al
dep: r-cran-combinat

GNU R package with utilities for combinatorics
dep: r-cran-ddrtree (>= 0.1.4)

GNU R learning principal graphs with DDRTree
dep: r-cran-dplyr

GNU R grammar of data manipulation
dep: r-cran-fastica

GNU R package for ICA and Projection Pursuit
dep: r-cran-ggplot2 (>= 1.0.0)

implementácia Gramatiky grafiky
dep: r-cran-igraph (>= 1.0.1)

GNU R network analysis and visualization
dep: r-cran-irlba (>= 2.0.0)

GNU R fast truncated SVD, PCA and symmetric eigendecomposition
dep: r-cran-leidenbase (>= 0.1.9)

GNU R and C/C++ Wrappers to Run the Leiden find_partition() Function
dep: r-cran-mass

balík MASS pre GNU R od Venable a Ripley
dep: r-cran-matrix (>= 1.2-6)

balík tried GNU R pre husté a riedke matice
dep: r-cran-matrixstats

GNU R methods that apply to rows and columns of a matrix
dep: r-cran-pheatmap

GNU R package to create pretty heatmaps
dep: r-cran-plyr

nástroje na rozdeľovanie, aplikovanie a kombinovanie dát
dep: r-cran-proxy

GNU R distance and similarity measures
dep: r-cran-qlcmatrix

GNU R utility sparse matrix functions for quantitative language
dep: r-cran-rann (>= 2.5)

Fast Nearest Neighbour Search Using L2 Metric
dep: r-cran-rcpp (>= 0.12.0)

balík GNU R na hladkú integráciu R a C++
dep: r-cran-reshape2

flexibilná zmena tvaru dát - reboot balíka reshape
dep: r-cran-rtsne

GNU R T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut
dep: r-cran-slam

GNU R sparse lighweight arrays and matrices package
dep: r-cran-stringr

uľahčenie práce s reťazcami
dep: r-cran-tibble

GNU R Simple Data Frames
dep: r-cran-vgam (>= 1.0-6)

GNU R package for estimating vector generalized additive models
dep: r-cran-viridis

GNU R - balík máp farieb z matplotlib

sug: r-bioc-scater

Single-Cell Analysis Toolkit for Gene Expression Data in R
sug: r-cran-hmisc

rozličné funkcie pre GNU R, ktoré napísal Frank Harrell
sug: r-cran-knitr

balík GNU R na dynamickú tvorbu zostáv pomocou Literate Programming
sug: r-cran-seurat

Tools for Single Cell Genomics
sug: r-cran-testthat

GNU R testsuite

Stiahnuť r-bioc-monocle

Stiahnuť pre všetky dostupné architektúry
Architektúra	Veľkosť balíka	Nainštalovaná veľkosť	Súbory
i386	1,388.8 kB	1,647.0 kB	[zoznam súborov]