[ Zdroj: ngmlr ]
Balík: ngmlr (0.2.7+git20210816.a2a31fb+dfsg-2 a iné)
Odkazy pre ngmlr
Zdroje Debian:
Stiahnuť zdrojový balík ngmlr:
- [ngmlr_0.2.7+git20210816.a2a31fb+dfsg-2.dsc]
- [ngmlr_0.2.7+git20210816.a2a31fb+dfsg.orig.tar.gz]
- [ngmlr_0.2.7+git20210816.a2a31fb+dfsg-2.debian.tar.xz]
Správcovia:
Externé zdroje:
- Domovská stránka [github.com]
Podobné balíky:
CoNvex Gap-cost alignMents for Long Reads
Ngmlr is a long-read mapper designed to sensitively align PacBilo or Oxford Nanopore to (large) reference genomes. It was designed to quickly and correctly align the reads, including those spanning (complex) structural variations. Ngmlr uses an SV aware k-mer search to find approximate mapping locations for a read and then a banded Smith- Waterman alignment algorithm to compute the final alignment. Ngmlr uses a convex gap cost model that penalizes gap extensions for longer gaps less than for shorter ones to compute precise alignments.
Ostatné balíky súvisiace s balíkom ngmlr
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- dep: libc6 (>= 2.34)
- knižnica GNU C - zdieľané knižnice
tiež virtuálny balík poskytovaný balíkom libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- podporná knižnica GCC
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- dep: libssw0 (>= 1.1)
- fast SIMD parallelized implementation of the Smith-Waterman algorithm
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- dep: libstdc++6 (>= 11)
- štandardná knižnica C++ GNU v3
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- dep: zlib1g (>= 1:1.1.4)
- komprimačná knižnica - dynamická verzia
Stiahnuť ngmlr
| Architektúra | Verzia | Veľkosť balíka | Nainštalovaná veľkosť | Súbory |
|---|---|---|---|---|
| amd64 | 0.2.7+git20210816.a2a31fb+dfsg-2+b1 | 673.7 kB | 1,157.0 kB | [zoznam súborov] |