Package: allelecount (4.3.0-2 and others) [debports]

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NGS copy number algorithms

Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each allele [ACGT] at that location (given any filter settings).

The alleleCount package primarily exists to prevent code duplication between some other projects, specifically AscatNGS and Battenberg.

Other Packages Related to allelecount

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dep: libc6 (>= 2.34)

GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
dep: libhts3t64 (>= 1.17)

C library for high-throughput sequencing data formats

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Architecture	Version	Package Size	Installed Size	Files
x32 (unofficial port)	4.3.0-2+b1	28.7 kB	90.0 kB	[list of files]