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[ Source: cassiopee  ]

Package: libcassie1v5 (1.0.9-4 and others)

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library implementating search algorithms

Cassiopee index and search library C implementation. It is a complete rewrite of the ruby Cassiopee gem. It scans an input genomic sequence (dna/rna/protein) and search for a subsequence with exact match or allowing substitutions (Hamming distance) and/or insertion/deletions.

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Download libcassie1v5

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 1.0.9-4+b1 37.7 kB212.0 kB [list of files]
amd64 1.0.9-4+b1 40.7 kB170.0 kB [list of files]
arm64 1.0.9-4+b1 37.2 kB209.0 kB [list of files]
armel 1.0.9-4+b1 35.5 kB141.0 kB [list of files]
armhf 1.0.9-4+b1 36.0 kB125.0 kB [list of files]
hppa (unofficial port) 1.0.9-4+b1 42.3 kB166.0 kB [list of files]
i386 1.0.9-4+b1 42.1 kB157.0 kB [list of files]
ia64 (unofficial port) 1.0.9-4+b1 45.3 kB231.0 kB [list of files]
m68k (unofficial port) 1.0.9-4+b1 39.9 kB153.0 kB [list of files]
mips64el 1.0.9-4+b1 36.2 kB219.0 kB [list of files]
ppc64 (unofficial port) 1.0.9-4+b1 40.9 kB210.0 kB [list of files]
ppc64el 1.0.9-4+b1 41.1 kB209.0 kB [list of files]
riscv64 1.0.9-4+b1 39.5 kB149.0 kB [list of files]
s390x 1.0.9-4+b1 38.9 kB165.0 kB [list of files]
sh4 (unofficial port) 1.0.9-4+b1 44.8 kB210.0 kB [list of files]
sparc64 (unofficial port) 1.0.9-4+b1 35.4 kB1,046.0 kB [list of files]
x32 (unofficial port) 1.0.9-4+b1 40.8 kB153.0 kB [list of files]