Package: coot (1.1.15+dfsg-1 and others)

Links for coot

Debian Resources:

Download Source Package coot:

Maintainers:

Debian Science Maintainers (QA Page, Mail Archive)
Morten Kjeldgaard (QA Page)
Picca Frédéric-Emmanuel (QA Page)
Andrius Merkys (QA Page)
Alex Myczko (QA Page)

External Resources:

Homepage [github.com]

Similar packages:

model building program for macromolecular crystallography

This is a program for constructing atomic models of macromolecules from x-ray diffraction data. Coot displays electron density maps and molecular models and allows model manipulations such as idealization, refinement, manual rotation/translation, rigid-body fitting, ligand search, solvation, mutations, rotamers. Validation tools such as Ramachandran and geometry plots are available to the user. This package provides a Coot build with embedded Python support.

Other Packages Related to coot

depends

recommends

suggests

enhances

dep: coot-data

various data files needed by Coot
dep: gir1.2-gtk-4.0

GTK graphical user interface library -- gir bindings
dep: libasound2t64 (>= 1.0.16)

shared library for ALSA applications
also a virtual package provided by liboss4-salsa-asound2
dep: libatomic1 (>= 4.8) [loong64, mips64el, riscv64]

support library providing __atomic built-in functions
dep: libblas3

Basic Linear Algebra Reference implementations, shared library

or libblas.so.3

virtual package provided by libatlas3-base, libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
dep: libboost-python1.83.0 (>= 1.83.0)

Boost.Python Library
dep: libboost-python1.83.0-py313

virtual package provided by libboost-python1.83.0
dep: libc6 (>= 2.38) [not loong64]

GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb

dep: libc6 (>= 2.41) [loong64]
dep: libcairo2 (>= 1.6.0)

Cairo 2D vector graphics library
dep: libclipper2 (>= 2.1.20201109)

object oriented library for crystallographic computing
dep: libcootapi1.1 (>= 1.1.15+dfsg)

shared library for coot
dep: libcurl3t64-gnutls (>= 7.16.2)

easy-to-use client-side URL transfer library (GnuTLS flavour)
dep: libepoxy0 (>= 1.3)

OpenGL function pointer management library
dep: libfreetype6 (>= 2.2.1)

FreeType 2 font engine, shared library files
dep: libgcc-s1 (>= 4.0)

GCC support library
dep: libgdk-pixbuf-2.0-0 (>= 2.31.1)

GDK Pixbuf library
dep: libglib2.0-0t64 (>= 2.80.0)

GLib library of C routines
dep: libgomp1 (>= 6)

GCC OpenMP (GOMP) support library
dep: libgraphene-1.0-0 (>= 1.5.4)

library of graphic data types
dep: libgsl28 (>= 2.8+dfsg)

GNU Scientific Library (GSL) -- library package
dep: libgtk-4-1 (>= 4.13.8)

GTK graphical user interface library
dep: libmmdb2-0 (>= 2.0.22)

macromolecular coordinate library - runtime
dep: libpango-1.0-0 (>= 1.14.0)

Layout and rendering of internationalized text
dep: libpangocairo-1.0-0 (>= 1.14.0)

Layout and rendering of internationalized text
dep: libpng16-16t64 (>= 1.6.46)

PNG library - runtime (version 1.6)
dep: libpython3.13 (>= 3.13.0~rc3)

Shared Python runtime library (version 3.13)
dep: librdkit1t64 (>= 202503.1)

Collection of cheminformatics and machine-learning software (shared libraries)
dep: libsqlite3-0 (>= 3.5.9)

SQLite 3 shared library
dep: libssm2 (>= 1.4.0)

macromolecular superposition library - runtime
dep: libstdc++6 (>= 14)

GNU Standard C++ Library v3
dep: libvorbisfile3 (>= 1.1.2)

high-level API for Vorbis General Audio Compression Codec
dep: python3

interactive high-level object-oriented language (default python3 version)

dep: python3 (<< 3.14)

dep: python3 (>= 3.13~)
dep: python3-gi

Python 3 bindings for gobject-introspection libraries
dep: python3-rdkit

Collection of cheminformatics and machine-learning software
dep: refmac-dictionary

dictionary for macromolecular refinement and model building
dep: sfftw2 (>= 2.1.5)

library for computing Fast Fourier Transforms
dep: zlib1g (>= 1:1.2.6)

compression library - runtime

sug: coot-doc

documentation for Coot

Download coot

Download for all available architectures
Architecture	Version	Package Size	Installed Size	Files
amd64	1.1.15+dfsg-1+b1	9,079.6 kB	34,527.0 kB	[list of files]
arm64	1.1.15+dfsg-1+b1	7,903.5 kB	32,935.0 kB	[list of files]
loong64 (unofficial port)	1.1.15+dfsg-1+b1	8,173.6 kB	33,441.0 kB	[list of files]
mips64el	1.1.15+dfsg-1+b1	7,722.5 kB	37,331.0 kB	[list of files]
ppc64el	1.1.15+dfsg-1+b1	8,963.6 kB	38,821.0 kB	[list of files]
riscv64	1.1.15+dfsg-1+b1	8,681.0 kB	27,362.0 kB	[list of files]