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[ Source: bioawk  ]

Package: bioawk (1.0-5)

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extension of awk for biological sequence analysis

Bioawk is an extension to Brian Kernighan's awk, adding the support of several common biological data formats, including optionally gzip'ed BED, GFF, SAM, VCF, FASTA/Q and TAB-delimited formats with column names. It also adds a few built-in functions and an command line option to use TAB as the input/output delimiter. When the new functionality is not used, bioawk is intended to behave exactly the same as the original BWK awk.

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Download bioawk

Download for all available architectures
Architecture Package Size Installed Size Files
alpha (unofficial port) 53.6 kB212.0 kB [list of files]
amd64 55.7 kB163.0 kB [list of files]
arm64 51.9 kB211.0 kB [list of files]
armel 50.7 kB150.0 kB [list of files]
armhf 49.7 kB118.0 kB [list of files]
hppa (unofficial port) 50.3 kB147.0 kB [list of files]
i386 59.2 kB174.0 kB [list of files]
ia64 (unofficial port) 70.5 kB282.0 kB [list of files]
m68k (unofficial port) 50.4 kB153.0 kB [list of files]
mips64el 55.0 kB220.0 kB [list of files]
ppc64 (unofficial port) 59.4 kB211.0 kB [list of files]
ppc64el 60.9 kB211.0 kB [list of files]
riscv64 57.9 kB147.0 kB [list of files]
s390x 55.6 kB171.0 kB [list of files]
sh4 (unofficial port) 60.9 kB146.0 kB [list of files]
sparc64 (unofficial port) 48.0 kB1,045.0 kB [list of files]
x32 (unofficial port) 56.1 kB150.0 kB [list of files]