Package: altree (1.3.2-4 and others)

Links for altree

Debian Resources:

Download Source Package altree:

Maintainers:

Debian Med Packaging Team (QA Page, Mail Archive)
Charles Plessy (QA Page)
Vincent Danjean (QA Page)
Andreas Tille (QA Page)

External Resources:

Homepage [gitlab.inria.fr]

Similar packages:

program to perform phylogeny-based association and localization analysis

ALTree was designed to perform association detection and localization of susceptibility sites using haplotype phylogenetic trees: first, it allows the detection of an association between a candidate gene and a disease, and second, it enables to make hypothesis about the susceptibility loci.

Tags: Software Development: Perl Development, Libraries, Field: field::biology, field::biology:bioinformatics, Implemented in: C, implemented-in::perl, interface::commandline, Role: Development Library, role::program, role::shared-lib, Scope: Utility, Purpose: Analysing, use::comparing, works-with-format::TODO, Supports Format: Plain Text, Works with: Need an extra tag

Other Packages Related to altree

depends

recommends

suggests

enhances

dep: libblas3

Basic Linear Algebra Reference implementations, shared library

or libblas.so.3

virtual package provided by libatlas3-base, libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
dep: libc6 (>= 2.38) [not alpha, ia64, loong64, sh4]

GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb

dep: libc6 (>= 2.41) [loong64, sh4]
dep: libc6.1 (>= 2.37) [ia64]

GNU C Library: Shared libraries
also a virtual package provided by libc6.1-udeb

dep: libc6.1 (>= 2.38) [alpha]
dep: libgsl27 (>= 2.7.1) [ia64]

GNU Scientific Library (GSL) -- library package
dep: libgsl28 (>= 2.8+dfsg) [not ia64]

GNU Scientific Library (GSL) -- library package
dep: libmath-tamuanova-perl

Perl extension for the tamuanova library
dep: perl (>= 5.38.2-3.2) [ia64]

Larry Wall's Practical Extraction and Report Language

dep: perl (>= 5.40.1-6) [not ia64]
dep: perlapi-5.38.2 [ia64]

virtual package provided by perl-base
dep: perlapi-5.40.1 [not ia64]

virtual package provided by perl-base

rec: libopenblas0

Optimized BLAS (linear algebra) library (meta)

or libblis4

BLAS-like Library Instantiation Software Framework (32bit,meta)

or libmkl-rt

Intel® MKL: Single Dynamic Library (SDL)

or libblas.so.3

virtual package provided by libatlas3-base, libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

sug: altree-examples

example files for ALTree

Download altree

Download for all available architectures
Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	1.3.2-4	333.5 kB	566.0 kB	[list of files]
amd64	1.3.2-4	333.4 kB	558.0 kB	[list of files]
arm64	1.3.2-4	333.5 kB	566.0 kB	[list of files]
armel	1.3.2-4	332.7 kB	565.0 kB	[list of files]
armhf	1.3.2-4	329.8 kB	565.0 kB	[list of files]
hppa (unofficial port)	1.3.2-4	335.8 kB	570.0 kB	[list of files]
i386	1.3.2-4	333.6 kB	561.0 kB	[list of files]
ia64 (unofficial port)	1.3.2-2+b2	345.3 kB	621.0 kB	[list of files]
loong64 (unofficial port)	1.3.2-4	335.4 kB	566.0 kB	[list of files]
m68k (unofficial port)	1.3.2-4	329.5 kB	549.0 kB	[list of files]
mips64el	1.3.2-4	334.1 kB	569.0 kB	[list of files]
ppc64 (unofficial port)	1.3.2-4	336.7 kB	631.0 kB	[list of files]
ppc64el	1.3.2-4	351.8 kB	630.0 kB	[list of files]
riscv64	1.3.2-4	335.9 kB	550.0 kB	[list of files]
s390x	1.3.2-4	333.8 kB	562.0 kB	[list of files]
sh4 (unofficial port)	1.3.2-4	334.7 kB	565.0 kB	[list of files]
sparc64 (unofficial port)	1.3.2-4	330.4 kB	1,528.0 kB	[list of files]
x32 (unofficial port)	1.3.2-4	332.9 kB	557.0 kB	[list of files]