Package: bioawk (1.0-5) [debports]
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- Homepage [github.com]
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extension of awk for biological sequence analysis
Bioawk is an extension to Brian Kernighan's awk, adding the support of several common biological data formats, including optionally gzip'ed BED, GFF, SAM, VCF, FASTA/Q and TAB-delimited formats with column names. It also adds a few built-in functions and an command line option to use TAB as the input/output delimiter. When the new functionality is not used, bioawk is intended to behave exactly the same as the original BWK awk.
Other Packages Related to bioawk
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- dep: libc6.1 (>= 2.34)
- GNU C Library: Shared libraries
also a virtual package provided by libc6.1-udeb
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- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
Download bioawk
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| alpha (unofficial port) | 53.6 kB | 212.0 kB | [list of files] |