Пакет: libseqlib-dev (1.2.0+dfsg-11 и другие) [debports]
Ссылки для libseqlib-dev
Ресурсы Debian:
Исходный код :
Не найденСопровождающие:
Внешние ресурсы:
- Сайт [github.com]
Подобные пакеты:
C++ htslib/bwa-mem/fermi interface for interrogating sequence data (dev)
C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment.
This package contains the header files and static library.
Другие пакеты, относящиеся к libseqlib-dev
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- dep: libbwa-dev
- Burrows-Wheeler Aligner source files
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- dep: libfml-dev
- development headers for libfml
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- dep: libhts-dev
- development files for the HTSlib
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- dep: libjsoncpp-dev
- library for reading and writing JSON for C++ (devel files)
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- dep: libseqlib2 (= 1.2.0+dfsg-11+b1)
- C++ htslib/bwa-mem/fermi interface for interrogating sequence data
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- dep: libssw-dev
- Development headers and static libraries for libssw
также виртуальный пакет, предоставляемый libssw-dev
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- dep: zlib1g-dev
- библиотека сжатия (файлы для разработчиков)
Загрузка libseqlib-dev
| Архитектура | Версия | Размер пакета | В установленном виде | Файлы |
|---|---|---|---|---|
| ppc64 (неофициальный перенос) | 1.2.0+dfsg-11+b1 | 217,4 Кб | 1 311,0 Кб | [список файлов] |