todas as opções
bullseye  ] [  bookworm  ] [  trixie  ] [  forky  ] [  sid  ]
[ Fonte: libseqlib  ]

Pacote: libseqlib2 (1.2.0+dfsg-11 e outros)

Links para libseqlib2

Screenshot

Recursos de Debian:

Baixe o pacote-fonte libseqlib:

Mantenedores(as):

Fontes externas:

Pacotes similares:

C++ htslib/bwa-mem/fermi interface for interrogating sequence data

C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment.

Outros pacotes relacionados a libseqlib2

  • depende
  • recomenda
  • sugere
  • melhora

Download de libseqlib2

Baixe para todas as arquiteturas disponíveis
Arquitetura Versão Tamanho do pacote Tamanho instalado Arquivos
amd64 1.2.0+dfsg-11+b3 168.1 kB564.0 kB [lista de arquivos]
arm64 1.2.0+dfsg-11+b3 143.3 kB533.0 kB [lista de arquivos]
armhf 1.2.0+dfsg-11+b3 138.4 kB339.0 kB [lista de arquivos]
i386 1.2.0+dfsg-11+b3 177.6 kB511.0 kB [lista de arquivos]
ppc64el 1.2.0+dfsg-11+b3 167.0 kB597.0 kB [lista de arquivos]
riscv64 1.2.0+dfsg-11+b3 156.6 kB396.0 kB [lista de arquivos]
s390x 1.2.0+dfsg-11+b3 157.8 kB512.0 kB [lista de arquivos]