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/usr/lib/transdecoder/sample_data/Makefile
/usr/lib/transdecoder/sample_data/README
/usr/lib/transdecoder/sample_data/README.md
/usr/lib/transdecoder/sample_data/cufflinks_example/Makefile
/usr/lib/transdecoder/sample_data/cufflinks_example/cleanme.pl
/usr/lib/transdecoder/sample_data/cufflinks_example/mini_Pfam-A.hmm.gz
/usr/lib/transdecoder/sample_data/cufflinks_example/mini_sprot.db.pep.gz
/usr/lib/transdecoder/sample_data/cufflinks_example/runMe.sh
/usr/lib/transdecoder/sample_data/cufflinks_example/test.genome.fasta.gz
/usr/lib/transdecoder/sample_data/cufflinks_example/test.tophat.sam.gz
/usr/lib/transdecoder/sample_data/cufflinks_example/transcripts.gtf.gz
/usr/lib/transdecoder/sample_data/pasa_example/Makefile
/usr/lib/transdecoder/sample_data/pasa_example/cleanme.pl
/usr/lib/transdecoder/sample_data/pasa_example/genome.fasta.gz
/usr/lib/transdecoder/sample_data/pasa_example/pasa_assemblies.fasta.gz
/usr/lib/transdecoder/sample_data/pasa_example/pasa_assemblies.gff3.gz
/usr/lib/transdecoder/sample_data/pasa_example/pasa_assemblies_described.txt.gz
/usr/lib/transdecoder/sample_data/pasa_example/runMe.sh
/usr/lib/transdecoder/sample_data/simple_transcriptome_target/Makefile
/usr/lib/transdecoder/sample_data/simple_transcriptome_target/Trinity.fasta.gz
/usr/lib/transdecoder/sample_data/simple_transcriptome_target/cleanme.pl
/usr/lib/transdecoder/sample_data/simple_transcriptome_target/genome_alignments.gmap.gff3.gz
/usr/lib/transdecoder/sample_data/simple_transcriptome_target/runMe.Docker.sh
/usr/lib/transdecoder/sample_data/simple_transcriptome_target/runMe.sh
/usr/lib/transdecoder/sample_data/stringtie_example/Makefile
/usr/lib/transdecoder/sample_data/stringtie_example/cleanme.pl
/usr/lib/transdecoder/sample_data/stringtie_example/runMe.sh
/usr/lib/transdecoder/sample_data/stringtie_example/stringtie_merged.gtf
/usr/lib/transdecoder/sample_data/stringtie_example/stringtie_merged.transcripts.fasta
/usr/lib/transdecoder/sample_data/supertranscripts_example/Makefile
/usr/lib/transdecoder/sample_data/supertranscripts_example/cleanme.pl
/usr/lib/transdecoder/sample_data/supertranscripts_example/runMe.sh
/usr/lib/transdecoder/sample_data/supertranscripts_example/supertranscripts.fasta
/usr/lib/transdecoder/sample_data/supertranscripts_example/supertranscripts.gtf
/usr/share/doc/transdecoder-doc/changelog.Debian.gz
/usr/share/doc/transdecoder-doc/changelog.gz
/usr/share/doc/transdecoder-doc/copyright
/usr/share/doc/transdecoder/README.md
/usr/share/doc/transdecoder/run-tests