Pakiet: topp (2.4.0-real-1)

Odnośniki dla topp

Zasoby systemu Debian:

Pobieranie pakietu źródłowego openms:

Opiekunowie:

Zasoby zewnętrzne:

Strona internetowa [www.openms.de]

Podobne pakiety:

set of programs implementing The OpenMS Proteomic Pipeline

TOPP (the OpenMS proteomic pipeline) is a pipeline for the analysis of HPLC/MS data. It consists of a set of numerous small applications that can be chained together to create analysis pipelines tailored for a specific problem. The applications make use of the libopenms library. Some examples of these applications are :

  - TOPPView: A viewer for mass spectrometry data.
  - TOPPAS: An assistant for GUI-driven TOPP workflow design.
  - DTAExtractor: Extracts spectra of an MS run file to several
    files in DTA format.
  - FileConverter:  Converts between different MS file formats.
  - FileFilter: Extracts or manipulates portions of data from peak,
    feature or consensus feature files.
  - SpectraMerger: Merges spectra from an LC/MS map, either by
    precursor or by RT blocks.
  - BaselineFilter: Removes the baseline from profile spectra using a
    top-hat filter.
  - InternalCalibration: Applies an internal calibration.
  - PTModel: Trains a model for the prediction of proteotypic
    peptides from a training set.
  - RTPredict: Predicts retention times for peptides using a model
    trained by RTModel.
  - ExecutePipeline: Executes workflows created by TOPPAS.

Znaczniki: Pakiet narzędziowy interfejsu: Qt

Inne pakiety związane z topp

wymaga

poleca

sugeruje

enhances

dep: coinor-libcbc3

Coin-or branch-and-cut mixed integer programming solver (shared libraries)
dep: coinor-libcgl1

COIN-OR Cut Generation Library
dep: coinor-libclp1

Coin-or linear programming solver (shared libraries)
dep: coinor-libcoinutils3v5

Coin-or collection of utility classes (binaries and libraries)
dep: coinor-libosi1v5

COIN-OR Open Solver Interface
dep: libboost-date-time1.67.0

set of date-time libraries based on generic programming concepts
dep: libboost-iostreams1.67.0

Biblioteka Boost.Iostreams
dep: libboost-math1.67.0

Biblioteka matematyczna Boost
dep: libboost-regex1.67.0 (>= 1.67.0-10)

regular expression library for C++
dep: libbz2-1.0

Wysokiej jakości biblioteka kompresji plików - wersja uruchomieniowa
dep: libc6 (>= 2.14) [amd64]

Biblioteka GNU C: biblioteki współdzielone
również pakiet wirtualny udostępniany przez libc6-udeb

dep: libc6 (>= 2.17) [arm64]

dep: libc6 (>= 2.4) [i386]
dep: libgcc1 (>= 1:3.0)

Biblioteka wspomagająca GCC
dep: libglpk40 (>= 4.59)

linear programming kit with integer (MIP) support
dep: libgomp1 (>= 4.9)

Biblioteka wspierająca GCC OpenMP (GOMP)
dep: libopenms2.4.0 (= 2.4.0-real-1)

library for LC/MS data management and analysis - runtime
dep: libqt5core5a (>= 5.11.0~rc1) [nie arm64]

Qt 5 core module

dep: libqt5core5a (>= 5.7.0) [arm64]
dep: libqt5gui5 (>= 5.8.0)

Qt 5 GUI module
dep: libqt5network5 (>= 5.7.0)

Qt 5 network module
dep: libqt5svg5 (>= 5.6.0~beta)

Qt 5 SVG module
dep: libqt5widgets5 (>= 5.7.0)

Qt 5 widgets module
dep: libsqlite3-0 (>= 3.5.9)

Biblioteka współdzielona SQLite 3
dep: libstdc++6 (>= 5.2)

Standardowa biblioteka GNU C++, wersja 3
dep: libsvm3

library implementing support vector machines
dep: libwildmagic5 (>= 5.13)

libraries for mathematics, physics, numerical methods - runtime
dep: libxerces-c3.2

validating XML parser library for C++
dep: openms-common (= 2.4.0-real-1)

package for LC/MS data management and analysis - shared data
dep: zlib1g (>= 1:1.1.4)

Biblioteka kompresyjna - pliki wykonawcze

sug: openms-doc

package for LC/MS data management and analysis - documentation

Pobieranie topp

Pobierz dla wszystkich dostępnych architektur
Architektura	Rozmiar pakietu	Rozmiar po instalacji	Pliki
amd64	2 656,4 KiB	15 117,0 KiB	[lista plików]
arm64	2 362,2 KiB	13 689,0 KiB	[lista plików]
i386	2 809,1 KiB	15 051,0 KiB	[lista plików]