Pakiet: grinder (0.5.4-5)

Odnośniki dla grinder

Zasoby systemu Debian:

Pobieranie pakietu źródłowego grinder:

Opiekunowie:

Zasoby zewnętrzne:

Strona internetowa [sourceforge.net]

Podobne pakiety:

Versatile omics shotgun and amplicon sequencing read simulator

Grinder is a versatile program to create random shotgun and amplicon sequence libraries based on DNA, RNA or proteic reference sequences provided in a FASTA file.

Grinder can produce genomic, metagenomic, transcriptomic, metatranscriptomic, proteomic, metaproteomic shotgun and amplicon datasets from current sequencing technologies such as Sanger, 454, Illumina. These simulated datasets can be used to test the accuracy of bioinformatic tools under specific hypothesis, e.g. with or without sequencing errors, or with low or high community diversity. Grinder may also be used to help decide between alternative sequencing methods for a sequence-based project, e.g. should the library be paired-end or not, how many reads should be sequenced.

Inne pakiety związane z grinder

wymaga

poleca

sugeruje

enhances

dep: libbio-perl-perl

BioPerl core perl modules
dep: libgetopt-euclid-perl

command line interface dynamically built from the documentation
dep: libmath-random-mt-perl

Perl implementation of the Mersenne Twister algorithm
dep: perl

praktyczny język ekstrakcji i raportowania Larry'ego Walla

Pobieranie grinder

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