Pakiet: r-bioc-phyloseq (1.42.0+dfsg-1)

Odnośniki dla r-bioc-phyloseq

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Pobieranie pakietu źródłowego r-bioc-phyloseq:

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Zasoby zewnętrzne:

Strona internetowa [bioconductor.org]

Podobne pakiety:

GNU R handling and analysis of high-throughput microbiome census data

The Bioconductor module phyloseq provides a set of classes and tools to facilitate the import, storage, analysis, and graphical display of microbiome census data.

Inne pakiety związane z r-bioc-phyloseq

wymaga

poleca

sugeruje

enhances

dep: r-api-4.0

pakiet wirtualny udostępniany przez r-base-core
dep: r-api-bioc-3.16

pakiet wirtualny udostępniany przez r-bioc-biocgenerics
dep: r-base-core (>= 4.2.2.20221110-1)

GNU R core of statistical computation and graphics system
dep: r-bioc-biobase (>= 2.36.2)

base functions for Bioconductor
dep: r-bioc-biocgenerics (>= 0.22.0)

generic functions for Bioconductor
dep: r-bioc-biomformat (>= 1.0.0)

GNU R interface package for the BIOM file format
dep: r-bioc-biostrings (>= 2.40.0)

GNU R string objects representing biological sequences
dep: r-bioc-multtest (>= 2.28.0)

Bioconductor resampling-based multiple hypothesis testing
dep: r-cran-ade4 (>= 1.7-4)

GNU R analysis of ecological data
dep: r-cran-ape (>= 5.0)

GNU R package for Analyses of Phylogenetics and Evolution
dep: r-cran-cluster (>= 2.0.4)

GNU R package for cluster analysis by Rousseeuw et al
dep: r-cran-data.table (>= 1.10.4)

GNU R extension of Data.frame
dep: r-cran-foreach (>= 1.4.3)

GNU R foreach looping support
dep: r-cran-ggplot2 (>= 2.1.0)

implementation of the Grammar of Graphics
dep: r-cran-igraph (>= 1.0.1)

GNU R network analysis and visualization
dep: r-cran-plyr (>= 1.8.3)

tools for splitting, applying and combining data
dep: r-cran-reshape2 (>= 1.4.1)

Flexibly reshape data: a reboot of the reshape package
dep: r-cran-scales (>= 0.4.0)

Scale functions for visualization
dep: r-cran-vegan (>= 2.5)

Community Ecology Package for R

sug: r-bioc-biocstyle (>= 2.4)

standard styles for vignettes and other Bioconductor documents
sug: r-bioc-deseq2 (>= 1.16.1)

R package for RNA-Seq Differential Expression Analysis
sug: r-bioc-genefilter (>= 1.58)

methods for filtering genes from microarray experiments
sug: r-bioc-metagenomeseq (>= 1.14)

GNU R statistical analysis for sparse high-throughput sequencing
sug: r-cran-knitr (>= 1.16)

GNU R package for dynamic report generation using Literate Programming
sug: r-cran-magrittr (>= 1.5)

GNU R forward-pipe operator
sug: r-cran-rmarkdown (>= 1.6)

convert R markdown documents into a variety of formats
sug: r-cran-testthat (>= 1.0.2)

GNU R testsuite

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