[ Pakiet źródłowy: cutesv ]
Pakiet: cutesv (2.0.2-1)
Odnośniki dla cutesv
Zasoby systemu Debian:
- Raporty o błędach
- Developer Information
- Dziennik zmian w systemie Debian
- Informacje nt. praw autorskich
- Śledzenie łatek systemu Debian
Pobieranie pakietu źródłowego cutesv:
Opiekunowie:
- Debian Med Packaging Team (Strona QA, Archiwum e-mail)
- Andreas Tille (Strona QA)
- Steffen Moeller (Strona QA)
Zasoby zewnętrzne:
- Strona internetowa [github.com]
Podobne pakiety:
comprehensive discovery of structural variations of genomic sequences
Long-read sequencing enables the comprehensive discovery of structural variations (SVs). However, it is still non-trivial to achieve high sensitivity and performance simultaneously due to the complex SV characteristics implied by noisy long reads.
cuteSV is a sensitive, fast and scalable long-read-based SV detection approach. cuteSV uses tailored methods to collect the signatures of various types of SVs and employs a clustering-and-refinement method to analyze the signatures to implement sensitive SV detection. Benchmarks on real Pacific Biosciences (PacBio) and Oxford Nanopore Technology (ONT) datasets demonstrate that cuteSV has better yields and scalability than state-of-the-art tools.
Inne pakiety związane z cutesv
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- dep: python3
- Interaktywny, wysokopoziomowy i obiektowy język programowania (domyślna wersja Python 3)
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- dep: python3-biopython
- Python3 library for bioinformatics
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- dep: python3-cigar
- manipulate SAM cigar strings
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- dep: python3-numpy
- Fast array facility to the Python 3 language
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- dep: python3-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
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- dep: python3-vcf
- Variant Call Format (VCF) parser for Python 3
Pobieranie cutesv
| Architektura | Rozmiar pakietu | Rozmiar po instalacji | Pliki |
|---|---|---|---|
| all | 32,2 KiB | 191,0 KiB | [lista plików] |