Bronpakket: salmon (1.10.2+ds1-1)
Verwijzigingen voor salmon
Debian bronnen:
Beheerders:
Externe bronnen:
De volgende binaire pakketten worden van dit bronpakket gebouwd:
- salmon
- wicked-fast transcript quantification from RNA-seq data
Andere aan salmon gerelateerde pakketten
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- adep:
debhelper-compat
(= 13)
- Pakket niet beschikbaar
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cmake
- cross-platform, open-source make system
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- adep:
libboost-filesystem-dev
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-
- adep:
libboost-system-dev
- Operating system (e.g. diagnostics support) library (default version)
-
- adep:
libboost-iostreams-dev
- Boost.Iostreams Library development files (default version)
-
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libboost-thread-dev
- portable C++ multi-threading (default version)
-
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libboost-program-options-dev
- program options library for C++ (default version)
-
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libboost-timer-dev
- C++ wall clock and CPU process timers (default version)
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libjellyfish-2.0-dev
- count k-mers in DNA sequences (development files of jellyfish)
-
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libpthread-stubs0-dev
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-
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libsparsehash-dev
- Google's extremely memory-efficient C++ hash_map implementation
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libdivsufsort-dev
- libdivsufsort header files
-
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libbwa-dev
- Burrows-Wheeler Aligner source files
-
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pkg-config
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-
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libjemalloc-dev
- development files and documentation for jemalloc
-
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libcereal-dev
- C++11 library for serialization
-
- adep:
libtbb-dev
- parallelism library for C++ - development files
-
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libgff-dev
(>> 2.0)
- GFF/GTF parsing from cufflinks as a library
-
- adep:
libstaden-read-dev
- development files for libstaden-read
-
- adep:
libspdlog-dev
- Very fast, header only or compiled, C++ logging library
-
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libtclap-dev
- Templatized command-line argument parser for C++
-
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help2man
- Automatic manpage generator
-
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sphinx-doc
- documentation generator for Python projects - documentation
-
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python3-sphinx
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-
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python3-sphinx-rtd-theme
- sphinx theme from readthedocs.org (Python 3)
-
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python3-docs-theme
- theme for the Python core documentation.
-
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zlib1g-dev
- compressie bibliotheek - voor ontwikkeling
-
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libeigen3-dev
- lightweight C++ template library for linear algebra
-
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libbz2-dev
- high-quality block-sorting file compressor library - development
-
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liblzma-dev
- XZ-format compression library - development files
-
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rapmap-dev
- rapmap - rapid sensitive and accurate DNA read mapping (some headers)
-
- adep:
libsimde-dev
- Implementations of SIMD instructions for all systems
