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Pakket: python3-voronotalt (1.29.4415+ds-1)

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Voronoi diagram-based tool to find atom contacts - Python3 bindings

The analysis of macromolecular structures often requires a comprehensive definition of atomic neighborhoods. Such a definition can be based on the Voronoi diagram of balls, where each ball represents an atom of some van der Waals radius. Voronota is a software tool for finding all the vertices of the Voronoi diagram of balls. Such vertices correspond to the centers of the empty tangent spheres defined by quadruples of balls. Voronota is especially suitable for processing three-dimensional structures of biological macromolecules such as proteins and RNA.

Since version 1.2 Voronota also uses the Voronoi vertices to construct inter-atom contact surfaces and solvent accessible surfaces. Voronota provides tools to query contacts, generate contacts graphics, compare contacts and evaluate quality of protein structural models using contacts.

This package contains Python 3 bindings.

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Pakket downloaden voor alle beschikbare platforms
Platform Pakketgrootte Geïnstalleerde grootte Bestanden
alpha (unofficial port) 110,7 kB498,0 kB [overzicht]
amd64 111,3 kB437,0 kB [overzicht]
arm64 102,8 kB433,0 kB [overzicht]
armel 103,1 kB492,0 kB [overzicht]
armhf 99,3 kB364,0 kB [overzicht]
i386 111,4 kB440,0 kB [overzicht]
mips64el 98,5 kB511,0 kB [overzicht]
ppc64el 106,4 kB497,0 kB [overzicht]
s390x 107,7 kB453,0 kB [overzicht]
sparc64 (unofficial port) 94,4 kB1.078,0 kB [overzicht]
x32 (unofficial port) 114,1 kB421,0 kB [overzicht]