Pakket: pscan-tfbs (1.2.2-4 en anderen)
Verwijzigingen voor pscan-tfbs
Debian bronnen:
Het bronpakket pscan-tfbs downloaden:
Beheerders:
Externe bronnen:
- Homepage [www.beaconlab.it]
Vergelijkbare pakketten:
search for transcription factor binding sites
Pscan finds Over-represented Transcription Factor Binding Site Motifs in Sequences from Co-Regulated or Co-Expressed Genes.
Pscan is a software tool that scans a set of sequences (e.g. promoters) from co-regulated or co-expressed genes with motifs describing the binding specificity of known transcription factors and assesses which motifs are significantly over- or under-represented, providing thus hints on which transcription factors could be common regulators of the genes studied, together with the location of their candidate binding sites in the sequences. Pscan does not resort to comparisons with orthologous sequences and experimental results show that it compares favorably to other tools for the same task in terms of false positive predictions and computation time. The website is free and open to all users and there is no login requirement.
Andere aan pscan-tfbs gerelateerde pakketten
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- dep: libc6 (>= 2.37) [sh4]
- GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb
- dep: libc6 (>= 2.38) [niet alpha, ia64, loong64, sh4]
- dep: libc6 (>= 2.39) [loong64]
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- dep: libc6.1 (>= 2.32) [ia64]
- GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6.1-udeb
- dep: libc6.1 (>= 2.34) [alpha]
-
- dep: libgcc-s1 (>= 3.3.1) [niet armel, armhf, hppa, ia64, m68k]
- GCC support bibliotheek
- dep: libgcc-s1 (>= 3.5) [armel, armhf]
- dep: libgcc-s1 (>= 4.2) [ia64]
-
- dep: libgcc-s2 (>= 4.2.1) [m68k]
- GCC support bibliotheek
-
- dep: libgcc-s4 (>= 4.1.1) [hppa]
- GCC support bibliotheek
-
- dep: libgsl27 (>= 2.7.1) [ia64]
- GNU Scientific Library (GSL) -- library package
-
- dep: libgsl28 (>= 2.8+dfsg) [niet ia64]
- GNU Scientific Library (GSL) -- library package
-
- dep: libgslcblas0 (>= 2.8) [sparc64]
- GNU Scientific Library (GSL) -- blas library package
-
- dep: libstdc++6 (>= 11) [ia64]
- GNU Standard C++ Library v3
- dep: libstdc++6 (>= 13.1) [niet ia64]
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- dep: libunwind8 [ia64]
- library to determine the call-chain of a program - runtime
pscan-tfbs downloaden
| Platform | Versie | Pakketgrootte | Geïnstalleerde grootte | Bestanden |
|---|---|---|---|---|
| alpha (unofficial port) | 1.2.2-4+b2 | 68,1 kB | 230,0 kB | [overzicht] |
| amd64 | 1.2.2-4+b3 | 75,3 kB | 209,0 kB | [overzicht] |
| arm64 | 1.2.2-4+b3 | 66,2 kB | 229,0 kB | [overzicht] |
| armel | 1.2.2-4+b3 | 65,0 kB | 172,0 kB | [overzicht] |
| armhf | 1.2.2-4+b3 | 63,1 kB | 132,0 kB | [overzicht] |
| hppa (unofficial port) | 1.2.2-4+b2 | 72,0 kB | 178,0 kB | [overzicht] |
| i386 | 1.2.2-4+b3 | 80,9 kB | 212,0 kB | [overzicht] |
| ia64 (unofficial port) | 1.2.2-4+b1 | 95,6 kB | 361,0 kB | [overzicht] |
| loong64 (unofficial port) | 1.2.2-4+b1 | 64,4 kB | 181,0 kB | [overzicht] |
| m68k (unofficial port) | 1.2.2-4+b2 | 68,2 kB | 180,0 kB | [overzicht] |
| mips64el | 1.2.2-4+b3 | 69,6 kB | 234,0 kB | [overzicht] |
| ppc64 (unofficial port) | 1.2.2-4+b2 | 74,1 kB | 229,0 kB | [overzicht] |
| ppc64el | 1.2.2-4+b3 | 75,0 kB | 229,0 kB | [overzicht] |
| riscv64 | 1.2.2-4+b2 | 71,1 kB | 149,0 kB | [overzicht] |
| s390x | 1.2.2-4+b3 | 75,9 kB | 201,0 kB | [overzicht] |
| sh4 (unofficial port) | 1.2.2-4+b2 | 85,3 kB | 228,0 kB | [overzicht] |
| sparc64 (unofficial port) | 1.2.2-4+b2 | 63,6 kB | 1.064,0 kB | [overzicht] |
| x32 (unofficial port) | 1.2.2-4+b2 | 74,8 kB | 192,0 kB | [overzicht] |