[ Bron: pizzly ]
Pakket: pizzly (0.37.3+ds-9)
Verwijzigingen voor pizzly
Debian bronnen:
Het bronpakket pizzly downloaden:
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Externe bronnen:
- Homepage [github.com]
Vergelijkbare pakketten:
Identifies gene fusions in RNA sequencing data
For the interpretation of the transcriptome (the abundance and sequence of RNA) of tomour cells one is particularly interested in transcripts that cannot be mapped to single genes but that are seen to be fused as parts from two genes. Likely eplanations are chromosomal translocations.
Pizzly can identify novel such peculiarities, building on interpretations on variable splicing by the tool kallisto. Both tools are elements of the bcbio workflow.
Andere aan pizzly gerelateerde pakketten
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- dep: kallisto
- near-optimal RNA-Seq quantification
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- dep: libc6 (>= 2.34)
- GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
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- rec: python3-h5py
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