Pakket: yanosim (0.1-5) [debports]
Verwijzigingen voor yanosim
Debian bronnen:
Het bronpakket downloaden:
Niet gevondenBeheerders:
Externe bronnen:
- Homepage [github.com]
Vergelijkbare pakketten:
read simulator nanopore DRS datasets
Yanosim has three options:
1. yanosim model:
Creates an model of mismatches, insertions and deletions based on an alignment of nanopore DRS reads to a reference. Reads should be aligned to a transcriptome i.e. without spliced alignment, using minimap2. They should have the cs tag.2. yanosim quantify:
Quantify the number of reads mapping to each transcript in a reference, so that the right number of reads can be simulated.3. yanosim simulate:
Given a model created using yanosim model, and per-transcript read counts created using yanosim simulate, simulate error-prone long-reads from the given fasta file.
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