[ bullseye ]
[ sid ]
[ Bron: sepp ]
Pakket: sepp (4.5.1+really4.5.1+dfsg-5)
Verwijzigingen voor sepp
Debian bronnen:
Het bronpakket sepp downloaden:
- [sepp_4.5.1+really4.5.1+dfsg-5.dsc]
- [sepp_4.5.1+really4.5.1+dfsg.orig.tar.xz]
- [sepp_4.5.1+really4.5.1+dfsg-5.debian.tar.xz]
Beheerders:
- Debian Med Packaging Team (QA-pagina, Mailarchief)
- Andreas Tille (QA-pagina)
- Pierre Gruet (QA-pagina)
Externe bronnen:
- Homepage [github.com]
Vergelijkbare pakketten:
phylogeny with ensembles of Hidden Markov Models
The tool SEPP implementing these methods uses ensembles of Hidden Markov Models (HMMs) in different ways, each focusing on a different problem.
SEPP stands for "SATe-enabled Phylogenetic Placement", and addresses the problem of phylogenetic placement of short reads into reference alignments and trees.
Andere aan sepp gerelateerde pakketten
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- dep: default-jre
- Standard Java or Java compatible Runtime
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- dep: hmmer
- profile hidden Markov models for protein sequence analysis
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- dep: libgoogle-gson-java
- Converts Java objects into their JSON representation
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- dep: libjenkins-json-java
- Library for transforming Java objects between XML and JSON
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- dep: libjson-java
- library for transforming Java objects and XML to JSON and back again
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- dep: ncbi-blast+
- next generation suite of BLAST sequence search tools
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- dep: pplacer
- phylogenetic placement and downstream analysis
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-dendropy
- DendroPy Phylogenetic Computing Library (Python 3)