[ Bron: libedlib ]
Pakket: edlib-aligner (1.2.7-6 en anderen)
Verwijzigingen voor edlib-aligner
Debian bronnen:
Het bronpakket libedlib downloaden:
Beheerders:
- Debian Med Packaging Team (QA-pagina, Mailarchief)
- Andreas Tille (QA-pagina)
- Étienne Mollier (QA-pagina)
Externe bronnen:
- Homepage [github.com]
Vergelijkbare pakketten:
edlib sequence alignment tool using edit distance
Edlib is a lightweight and super fast C/C++ library for sequence alignment using edit distance. This package provides an aligner using this library.
Features of libedlib
* Calculates edit distance (Levehnstein distance). * It can find optimal alignment path (instructions how to transform first sequence into the second sequence). * It can find just the start and/or end locations of alignment path - can be useful when speed is more important than having exact alignment path. * Supports multiple alignment methods: global(NW), prefix(SHW) and infix(HW), each of them useful for different scenarios. * You can extend character equality definition, enabling you to e.g. have wildcard characters, to have case insensitive alignment or to work with degenerate nucleotides. * It can easily handle small or very large sequences, even when finding alignment path, while consuming very little memory. * Super fast thanks to Myers's bit-vector algorithm.
Andere aan edlib-aligner gerelateerde pakketten
|
|
|
|
-
- dep: libc6 (>= 2.38)
- GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb
-
- dep: libedlib1 (= 1.2.7-6+b3)
- library for sequence alignment using edit distance
-
- dep: libgcc-s1 (>= 3.3.1) [niet armhf]
- GCC support bibliotheek
- dep: libgcc-s1 (>= 3.5) [armhf]
-
- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
edlib-aligner downloaden
Platform | Versie | Pakketgrootte | Geïnstalleerde grootte | Bestanden |
---|---|---|---|---|
amd64 | 1.2.7-6+b3 | 24,4 kB | 71,0 kB | [overzicht] |
arm64 | 1.2.7-6+b3 | 23,0 kB | 87,0 kB | [overzicht] |
armhf | 1.2.7-6+b3 | 20,5 kB | 86,0 kB | [overzicht] |
i386 | 1.2.7-6+b3 | 23,7 kB | 62,0 kB | [overzicht] |
ppc64el | 1.2.7-6+b3 | 26,2 kB | 87,0 kB | [overzicht] |
riscv64 | 1.2.7-6+b3 | 21,4 kB | 51,0 kB | [overzicht] |
s390x | 1.2.7-6+b3 | 25,2 kB | 67,0 kB | [overzicht] |