[ Bron: murasaki ]
Pakket: murasaki-common (1.68.6-8)
Verwijzigingen voor murasaki-common
Debian bronnen:
Het bronpakket murasaki downloaden:
Beheerders:
Externe bronnen:
- Homepage [murasaki.dna.bio.keio.ac.jp]
Vergelijkbare pakketten:
homology detection tool across multiple large genomes (common files)
Murasaki is a scalable and fast, language theory-based homology detection tool across multiple large genomes. It enable whole-genome scale multiple genome global alignments. Supports unlimited length gapped-seed patterns and unique TF-IDF based filtering.
Murasaki is an anchor alignment software, which is
* exteremely fast (17 CPU hours for whole Human x Mouse genome (with 40 nodes: 52 wall minutes)) * scalable (Arbitrarily parallelizable across multiple nodes using MPI. Even a single node with 16GB of ram can handle over 1Gbp of sequence.) * unlimited pattern length * repeat tolerant * intelligent noise reduction
This package contains all files that are common to the single core murasaki package and the multi core murasaki-mpi package.
Andere aan murasaki-common gerelateerde pakketten
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- dep: gnuplot
- Command-line driven interactive plotting program.
Ook een virtueel pakket geboden door: gnuplot-nox, gnuplot-qt, gnuplot-x11 - of gnuplot5
- Pakket niet beschikbaar
-
- dep: imagemagick
- image manipulation programs -- binaries
Ook een virtueel pakket geboden door: graphicsmagick-imagemagick-compat, imagemagick-6.q16
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- dep: libbio-perl-perl
- BioPerl core perl modules
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- dep: r-cran-rocr
- GNU R package to prepare and display ROC curves
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- rec: libterm-readkey-perl
- perl module for simple terminal control
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- rec: libtext-wrapi18n-perl
- alternatief voor Text::Wrap met internationalisatie
- of libtext-wrapper-perl
- simple word wrapping routine