[ Bron: ggd-utils ]
Pakket: ggd-utils (0.0.7+ds-3 en anderen)
Verwijzigingen voor ggd-utils
Debian bronnen:
Het bronpakket ggd-utils downloaden:
Beheerders:
Externe bronnen:
- Homepage [github.com]
Vergelijkbare pakketten:
programs for use in ggd
Takes a genome file and (currently) a .vcf.gz or a .bed.gz and checks that:
* a .tbi is present
* the VCF has ""##fileformat=VCF" as the first
line
* the VCF has a #CHROM header
* the chromosome are in the order specified by
the genome file (and present)
* the positions are sorted
* the positions are <= the chromosome lengths
defined in the genome file.
As a result, any new genome going into GGD will have a .genome file that will dictate the sort order and presence or absence of the 'chr' prefix for chromosomes
Andere aan ggd-utils gerelateerde pakketten
|
|
|
|
-
- dep: libc6 (>= 2.4)
- GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb