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[ Bron: htslib  ]

Pakket: libhts3 (1.11-4)

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C library for high-throughput sequencing data formats

HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang.

HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent.

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libhts3 downloaden

Pakket downloaden voor alle beschikbare platforms
Platform Pakketgrootte Geïnstalleerde grootte Bestanden
amd64 369,6 kB908,0 kB [overzicht]
arm64 337,5 kB844,0 kB [overzicht]
armel 320,2 kB808,0 kB [overzicht]
armhf 324,7 kB600,0 kB [overzicht]
i386 398,8 kB988,0 kB [overzicht]
mips64el 341,4 kB985,0 kB [overzicht]
mipsel 354,4 kB958,0 kB [overzicht]
ppc64el 406,1 kB1.301,0 kB [overzicht]
s390x 338,9 kB936,0 kB [overzicht]