Pakket: circlator (1.5.6-5)

Verwijzigingen voor circlator

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Homepage [sanger-pathogens.github.io]

Vergelijkbare pakketten:

circularize genome assemblies

Circlator is a tool to automate assembly circularization for bacterial and small eukaryotic genomes and produce accurate linear representations of circular sequences.

Tags: Biology: Nucleic Acids, Field: Biology, field::biology:bioinformatics, implemented-in::python, Role: Program, Wetenschap: science::calculation, works-with::biological-sequence, Works with: Bestanden

Andere aan circlator gerelateerde pakketten

depends

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suggests

enhances

dep: bwa (>= 0.7.12)

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dep: canu

single molecule sequence assembler for genomes
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dep: mummer

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dep: prodigal

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dep: python3

interactive high-level object-oriented language (default python3 version)
dep: python3-openpyxl

Python 3 module to read/write OpenXML xlsx/xlsm files
dep: python3-pymummer

Python 3 interface to MUMmer
dep: python3-pysam

interface for the SAM/BAM sequence alignment and mapping format (Python 3)
dep: samtools

processing sequence alignments in SAM, BAM and CRAM formats
dep: spades

genome assembler for single-cell and isolates data sets

circlator downloaden

Pakket downloaden voor alle beschikbare platforms
Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	4.369,4 kB	10.531,0 kB	[overzicht]