Pakket: bedtools (2.30.0+dfsg-1)

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Het bronpakket bedtools downloaden:

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Homepage [github.com]

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suite of utilities for comparing genomic features

The BEDTools utilities allow one to address common genomics tasks such as finding feature overlaps and computing coverage. The utilities are largely based on four widely-used file formats: BED, GFF/GTF, VCF, and SAM/BAM. Using BEDTools, one can develop sophisticated pipelines that answer complicated research questions by streaming several BEDTools together.

The groupBy utility is distributed in the filo package.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c++, interface::commandline, Role: Program, Scope: Suite, Purpose: use::analysing, use::comparing, Data Conversion, use::filtering, works-with::biological-sequence

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bedtools downloaden

Pakket downloaden voor alle beschikbare platforms
Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	647,5 kB	2.060,0 kB	[overzicht]
arm64	565,4 kB	1.864,0 kB	[overzicht]
armel	535,4 kB	1.759,0 kB	[overzicht]
armhf	559,3 kB	1.275,0 kB	[overzicht]
i386	708,4 kB	2.275,0 kB	[overzicht]
mips64el	585,1 kB	2.591,0 kB	[overzicht]
mipsel	603,6 kB	2.459,0 kB	[overzicht]
ppc64el	663,0 kB	2.520,0 kB	[overzicht]
s390x	567,1 kB	2.100,0 kB	[overzicht]