[ Bron: seqan-raptor ]
Pakket: seqan-raptor (2.0.0.0.git.fecfbca+ds-3)
Verwijzigingen voor seqan-raptor
Debian bronnen:
Het bronpakket seqan-raptor downloaden:
- [seqan-raptor_2.0.0.0.git.fecfbca+ds-3.dsc]
- [seqan-raptor_2.0.0.0.git.fecfbca+ds.orig.tar.xz]
- [seqan-raptor_2.0.0.0.git.fecfbca+ds-3.debian.tar.xz]
Beheerders:
Externe bronnen:
- Homepage [github.com]
Vergelijkbare pakketten:
pre-filter for querying very large collections of nucleotide sequences
Raptor is a system for approximately searching many queries such as next-generation sequencing reads or transcripts in large collections of nucleotide sequences. Raptor uses winnowing minimizers to define a set of representative k-mers, an extension of the interleaved Bloom filters (IBFs) as a set membership data structure and probabilistic thresholding for minimizers. This approach allows compression and partitioning of the IBF to enable the effective use of secondary memory.
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