Package: spoa (4.0.8-2~0exp0simde) [debports]
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- Homepage [github.com]
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Experimental package
Warning: This package is from the experimental distribution. That means it is likely unstable or buggy, and it may even cause data loss. Please be sure to consult the changelog and other possible documentation before using it.
SIMD partial order alignment tool
Spoa (SIMD POA) is a c++ implementation of the partial order alignment (POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which is used to generate consensus sequences (as described in 10.1093/bioinformatics/btg109). It supports three alignment modes: local (Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment (overlap).
Other Packages Related to spoa
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- dep: libc6 (>= 2.34)
- GNU C 라이브러리: 공유 라이브러리
also a virtual package provided by libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC 기능 지원 라이브러리
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- dep: libspoa7.0.0 (>= 4.0.8)
- SIMD partial order alignment library
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- dep: libstdc++6 (>= 11)
- GNU 표준 C++ 라이브러리 v3
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- dep: zlib1g (>= 1:1.1.4)
- 압축 라이브러리 - 런타임
Download spoa
Architecture | Package Size | Installed Size | Files |
---|---|---|---|
riscv64 (unofficial port) | 34.3 kB | 66.0 kB | [list of files] |