Package: libssw1 (1.2.5-1 and others)
Links for libssw1
Debian Resources:
Download Source Package libssw:
Maintainers:
- Debian Med Packaging Team (QA Page, Mail Archive)
- Sascha Steinbiss (QA Page)
- Michael R. Crusoe (QA Page)
External Resources:
- Homepage [github.com]
Similar packages:
Experimental package
Warning: This package is from the experimental distribution. That means it is likely unstable or buggy, and it may even cause data loss. Please be sure to consult the changelog and other possible documentation before using it.
fast SIMD parallelized implementation of the Smith-Waterman algorithm
SSW is a fast implementation of the Smith-Waterman algorithm, which uses the Single-Instruction Multiple-Data (SIMD) instructions to parallelize the algorithm at the instruction level. SSW library provides an API that can be flexibly used by programs written in C, C++ and other languages. The library can do protein and genome alignment directly. Current version of this implementation is ~50 times faster than an ordinary Smith-Waterman. It can return the Smith-Waterman score, alignment location and traceback path (cigar) of the optimal alignment accurately; and return the sub-optimal alignment score and location heuristically.
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Download libssw1
| Architecture | Version | Package Size | Installed Size | Files |
|---|---|---|---|---|
| alpha (unofficial port) | 1.2.5-1 | 24.3 kB | 85.0 kB | [list of files] |
| amd64 | 1.2.5-1 | 20.9 kB | 56.0 kB | [list of files] |
| arm64 | 1.2.5-1 | 19.4 kB | 84.0 kB | [list of files] |
| armel | 1.2.5-1 | 20.2 kB | 56.0 kB | [list of files] |
| armhf | 1.2.5-1 | 20.7 kB | 52.0 kB | [list of files] |
| i386 | 1.2.5-1 | 25.2 kB | 80.0 kB | [list of files] |
| ia64 (unofficial port) | 1.2.5-1 | 28.7 kB | 89.0 kB | [list of files] |
| loong64 (unofficial port) | 1.2.5-1 | 22.5 kB | 69.0 kB | [list of files] |
| m68k (unofficial port) | 1.2.5-1 | 23.1 kB | 68.0 kB | [list of files] |
| mips64el | 1.2.5-1 | 24.5 kB | 86.0 kB | [list of files] |
| ppc64 (unofficial port) | 1.2.5-1 | 25.4 kB | 84.0 kB | [list of files] |
| ppc64el | 1.2.5-1 | 19.7 kB | 84.0 kB | [list of files] |
| riscv64 | 1.2.5-1+b1 | 25.4 kB | 57.0 kB | [list of files] |
| s390x | 1.2.5-1 | 24.7 kB | 68.0 kB | [list of files] |
| sh4 (unofficial port) | 1.2.5-1 | 26.9 kB | 84.0 kB | [list of files] |
| sparc64 (unofficial port) | 1.2.5-1 | 23.0 kB | 1,046.0 kB | [list of files] |
| x32 (unofficial port) | 1.2.5-1 | 20.8 kB | 56.0 kB | [list of files] |