[ ソース: r-bioc-monocle ]
パッケージ: r-bioc-monocle (2.18.0-1)
r-bioc-monocle に関するリンク
Debian の資源:
r-bioc-monocle ソースパッケージをダウンロード:
- [r-bioc-monocle_2.18.0-1.dsc]
- [r-bioc-monocle_2.18.0.orig.tar.gz]
- [r-bioc-monocle_2.18.0-1.debian.tar.xz]
メンテナ:
外部の資源:
- ホームページ [bioconductor.org]
類似のパッケージ:
clustering, differential expression, and trajectory analysis for RNA-Seq
Monocle performs differential expression and time-series analysis for single-cell expression experiments. It orders individual cells according to progress through a biological process, without knowing ahead of time which genes define progress through that process. Monocle also performs differential expression analysis, clustering, visualization, and other useful tasks on single cell expression data. It is designed to work with RNA-Seq and qPCR data, but could be used with other types as well.
その他の r-bioc-monocle 関連パッケージ
|
|
|
|
-
- dep: libc6 (>= 2.4)
- GNU C ライブラリ: 共有ライブラリ
以下のパッケージによって提供される仮想パッケージでもあります: libc6-udeb
-
- dep: libgcc-s1 (>= 3.0)
- GCC 共有ライブラリ
-
- dep: libstdc++6 (>= 5.2)
- GNU 標準 C++ ライブラリ v3
-
- dep: r-api-4.0
- 以下のパッケージによって提供される仮想パッケージです: r-base-core
-
- dep: r-api-bioc-3.12
- 以下のパッケージによって提供される仮想パッケージです: r-bioc-biocgenerics
-
- dep: r-base-core (>= 4.0.3-1)
- GNU R core of statistical computation and graphics system
-
- dep: r-bioc-biobase
- base functions for Bioconductor
-
- dep: r-bioc-biocgenerics
- generic functions for Bioconductor
-
- dep: r-bioc-biocviews
- Categorized views of R package repositories
-
- dep: r-bioc-hsmmsinglecell (>= 0.101.5)
- Single-cell RNA-Seq for differentiating human skeletal muscle myoblasts
-
- dep: r-bioc-limma
- linear models for microarray data
-
- dep: r-cran-cluster
- Rousseeuw et al によるクラスタ分析用 GNU R パッケージ
-
- dep: r-cran-combinat
- GNU R package with utilities for combinatorics
-
- dep: r-cran-ddrtree (>= 0.1.4)
- GNU R learning principal graphs with DDRTree
-
- dep: r-cran-densityclust (>= 0.3)
- GNU R clustering by fast search and find of density peaks
-
- dep: r-cran-dplyr
- GNU R grammar of data manipulation
-
- dep: r-cran-fastica
- GNU R package for ICA and Projection Pursuit
-
- dep: r-cran-ggplot2 (>= 1.0.0)
- implementation of the Grammar of Graphics
-
- dep: r-cran-igraph (>= 1.0.1)
- GNU R network analysis and visualization
-
- dep: r-cran-irlba (>= 2.0.0)
- GNU R fast truncated SVD, PCA and symmetric eigendecomposition
-
- dep: r-cran-mass
- GNU R package of Venables and Ripley's MASS
-
- dep: r-cran-matrix (>= 1.2-6)
- GNU R package of classes for dense and sparse matrices
-
- dep: r-cran-matrixstats
- GNU R methods that apply to rows and columns of a matrix
-
- dep: r-cran-pheatmap
- GNU R package to create pretty heatmaps
-
- dep: r-cran-plyr
- tools for splitting, applying and combining data
-
- dep: r-cran-proxy
- GNU R distance and similarity measures
-
- dep: r-cran-qlcmatrix
- GNU R utility sparse matrix functions for quantitative language
-
- dep: r-cran-rann (>= 2.5)
- Fast Nearest Neighbour Search Using L2 Metric
-
- dep: r-cran-rcpp (>= 0.12.0)
- GNU R package for Seamless R and C++ Integration
-
- dep: r-cran-reshape2
- Flexibly reshape data: a reboot of the reshape package
-
- dep: r-cran-rtsne
- GNU R T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut
-
- dep: r-cran-slam
- GNU R sparse lighweight arrays and matrices package
-
- dep: r-cran-stringr
- Make it easier to work with strings
-
- dep: r-cran-tibble
- GNU R Simple Data Frames
-
- dep: r-cran-vgam (>= 1.0-6)
- GNU R package for estimating vector generalized additive models
-
- dep: r-cran-viridis
- GNU R package for color maps from matplotlib
-
- rec: r-cran-testthat
- GNU R testsuite
-
- sug: r-bioc-destiny
- GNU R diffusion maps
-
- sug: r-bioc-scater
- Single-Cell Analysis Toolkit for Gene Expression Data in R
-
- sug: r-cran-hmisc
- GNU R miscellaneous functions by Frank Harrell
-
- sug: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
-
- sug: r-cran-seurat
- Tools for Single Cell Genomics