Package: spoa (4.0.8-2~0exp0simde) [debports]
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Experimental package
Warning: This package is from the experimental distribution. That means it is likely unstable or buggy, and it may even cause data loss. Please be sure to consult the changelog and other possible documentation before using it.
SIMD partial order alignment tool
Spoa (SIMD POA) is a c++ implementation of the partial order alignment (POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which is used to generate consensus sequences (as described in 10.1093/bioinformatics/btg109). It supports three alignment modes: local (Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment (overlap).
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- dep: libspoa7.0.0 (>= 4.0.8)
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- dep: libstdc++6 (>= 11)
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Download spoa
Architecture | Package Size | Installed Size | Files |
---|---|---|---|
riscv64 (unofficial port) | 34.3 kB | 66.0 kB | [list of files] |