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[ Source: spoa  ]

Package: libspoa7.0.0 (4.0.7+ds-1 and others)

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SIMD partial order alignment library

Spoa (SIMD POA) is a c++ implementation of the partial order alignment (POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which is used to generate consensus sequences (as described in 10.1093/bioinformatics/btg109). It supports three alignment modes: local (Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment (overlap).

This package contains the shared library.

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Download for all available architectures
Architecture Version Package Size Installed Size Files
amd64 4.0.7+ds-1+b1 65.2 kB284.0 kB [list of files]
arm64 4.0.7+ds-1+b1 45.3 kB129.0 kB [list of files]
armel 4.0.7+ds-1+b1 50.1 kB149.0 kB [list of files]
armhf 4.0.7+ds-1+b1 56.7 kB121.0 kB [list of files]
i386 4.0.7+ds-1+b1 85.5 kB505.0 kB [list of files]
mips64el 4.0.7+ds-1+b1 60.5 kB179.0 kB [list of files]
mipsel 4.0.7+ds-1+b1 63.2 kB181.0 kB [list of files]
ppc64el 4.0.7+ds-1+b1 57.5 kB209.0 kB [list of files]
s390x 4.0.7+ds-1+b1 58.4 kB182.0 kB [list of files]