[ Source: r-bioc-deseq2 ]
Package: r-bioc-deseq2 (1.30.1+dfsg-1)
Links for r-bioc-deseq2
Debian Resources:
Download Source Package r-bioc-deseq2:
- [r-bioc-deseq2_1.30.1+dfsg-1.dsc]
- [r-bioc-deseq2_1.30.1+dfsg.orig.tar.xz]
- [r-bioc-deseq2_1.30.1+dfsg-1.debian.tar.xz]
Maintainers:
External Resources:
- Homepage [bioconductor.org]
Similar packages:
R package for RNA-Seq Differential Expression Analysis
Differential gene expression analysis based on the negative binomial distribution. Estimate variance-mean dependence in count data from high-throughput sequencing assays and test for differential expression based on a model using the negative binomial distribution.
Other Packages Related to r-bioc-deseq2
|
|
|
|
-
- dep: libblas3
- Basic Linear Algebra Reference implementations, shared library
- or libblas.so.3
- virtual package provided by libatlas3-base, libblas3, libblis3-openmp, libblis3-pthread, libblis3-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
-
- dep: libc6 (>= 2.29)
- GNU C könyvtár: megosztott könyvtárak
also a virtual package provided by libc6-udeb
-
- dep: libgcc-s1 (>= 3.0)
- GCC támogató programkönyvtár
-
- dep: liblapack3
- Library of linear algebra routines 3 - shared version
- or liblapack.so.3
- virtual package provided by libatlas3-base, liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
-
- dep: libstdc++6 (>= 9)
- GNU Standard C++ Library v3
-
- dep: r-api-4.0
- virtual package provided by r-base-core
-
- dep: r-api-bioc-3.12
- virtual package provided by r-bioc-biocgenerics
-
- dep: r-base-core (>= 4.0.4-1)
- GNU R core of statistical computation and graphics system
-
- dep: r-bioc-biobase
- base functions for Bioconductor
-
- dep: r-bioc-biocgenerics (>= 0.7.5)
- generic functions for Bioconductor
-
- dep: r-bioc-biocparallel
- BioConductor facilities for parallel evaluation
-
- dep: r-bioc-genefilter
- methods for filtering genes from microarray experiments
-
- dep: r-bioc-geneplotter
- R package of functions for plotting genomic data
-
- dep: r-bioc-genomicranges
- BioConductor representation and manipulation of genomic intervals
-
- dep: r-bioc-iranges
- GNU R low-level containers for storing sets of integer ranges
-
- dep: r-bioc-s4vectors (>= 0.23.18)
- BioConductor S4 implementation of vectors and lists
-
- dep: r-bioc-summarizedexperiment (>= 1.1.6)
- BioConductor assay container
-
- dep: r-cran-ggplot2
- implementation of the Grammar of Graphics
-
- dep: r-cran-locfit
- GNU R local regression, likelihood and density estimation
-
- dep: r-cran-rcpp (>= 0.11.0)
- GNU R package for Seamless R and C++ Integration
-
- dep: r-cran-rcpparmadillo
- GNU R package for Armadillo C++ linear algebra library
-
- rec: r-bioc-glmgampoi
- GNU R fit a Gamma-Poisson generalized linear model
-
- rec: r-bioc-tximport
- transcript-level estimates for biological sequencing
-
- rec: r-cran-testthat
- GNU R testsuite
-
- sug: r-cran-biocmanager
- access the Bioconductor project package repository
-
- sug: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
-
- sug: r-cran-pbapply
- GNU R package providing progress bars for vectorized R functions
-
- sug: r-cran-pheatmap
- GNU R package to create pretty heatmaps
-
- sug: r-cran-rcolorbrewer
- GNU R package providing suitable color palettes
-
- sug: r-cran-readr
- GNU R package to read rectangular text data
-
- sug: r-cran-rmarkdown
- convert R markdown documents into a variety of formats
Download r-bioc-deseq2
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| i386 | 1,233.7 kB | 1,929.0 kB | [list of files] |