Paquet : libseqlib-dev (1.2.0+dfsg-11 et autres) [debports]
Liens pour libseqlib-dev
Ressources Debian :
Télécharger le paquet source :
IntrouvableResponsables :
Ressources externes :
- Page d'accueil [github.com]
Paquets similaires :
C++ htslib/bwa-mem/fermi interface for interrogating sequence data (dev)
C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment.
This package contains the header files and static library.
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Télécharger libseqlib-dev
| Architecture | Version | Taille du paquet | Espace occupé une fois installé | Fichiers |
|---|---|---|---|---|
| sparc64 (portage non officiel) | 1.2.0+dfsg-11+b1 | 186,2 ko | 1 191,0 ko | [liste des fichiers] |