Source Package: ariba (2.14.6+ds-1)
Links for ariba
Debian-palvelut:
Ylläpitäjät:
External Resources:
Seuraavat binääripaketit on käännetty tästä lähdepaketista:
- ariba
- Antibiotic Resistance Identification By Assembly
Muut pakettiin ariba liittyvät paketit
-
- adep:
debhelper-compat
(= 13)
- Paketti ei saatavilla
-
- adep:
dh-python
- Debian helper tools for packaging Python libraries and applications
-
- adep:
python3-biopython
- Python3 library for bioinformatics
-
- adep:
python3-all-dev
- package depending on all supported Python 3 development packages
-
- adep:
python3-dendropy
- DendroPy Phylogenetic Computing Library (Python 3)
-
- adep:
python3-setuptools
- Python3 Distutils Enhancements
-
- adep:
python3-pymummer
(>= 0.10.2)
- Python 3 interface to MUMmer
-
- adep:
python3-pysam
(>= 0.9.1)
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
-
- adep:
python3-nose
(>= 1.3)
- test discovery and running for Python3 unittest
-
- adep:
python3-bs4
- error-tolerant HTML parser for Python 3
-
- adep:
python3-matplotlib
- Python based plotting system in a style similar to Matlab (Python 3)
-
- adep:
python3-tk
- Tkinter - Writing Tk applications with Python 3.x
-
- adep:
bowtie2
(>= 2.1.0)
- ultrafast memory-efficient short read aligner
-
- adep:
cd-hit
- suite of programs designed to quickly group sequences
-
- adep:
mash
- fast genome and metagenome distance estimation using MinHash
-
- adep:
libminimap-dev
- development headers for libminimap
-
- adep:
libfml-dev
(>= 0.1-4~)
- development headers for libfml
-
- adep:
mummer
- Efficient sequence alignment of full genomes
-
- adep:
fastaq
(>= 3.12.0)
- FASTA and FASTQ file manipulation tools
-
- adep:
help2man
- Automatic manpage generator
-
- adep:
asciidoctor
- AsciiDoc to HTML rendering for Ruby
-
- adep:
spades
[amd64]
- genome assembler for single-cell and isolates data sets
