Source Package: python-biopython (1.78+dfsg-4)
Links for python-biopython
Debian-palvelut:
Ylläpitäjät:
External Resources:
Muut pakettiin python-biopython liittyvät paketit
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- adep:
debhelper-compat
(= 13)
- Paketti ei saatavilla
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- adep:
dh-python
- Debian helper tools for packaging Python libraries and applications
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- adep:
python3-all-dev
- package depending on all supported Python 3 development packages
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- adep:
python3-numpy
- Fast array facility to the Python 3 language
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- adep:
flex
- fast lexical analyzer generator
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- adep:
python3-reportlab
- ReportLab library to create PDF documents using Python3
-
- adep:
hevea
- translates from LaTeX to HTML, info, or text
-
- adep:
texlive-latex-base
- TeX Live: LaTeX fundamental packages
-
- adep:
texlive-latex-extra
- TeX Live: LaTeX additional packages
-
- adep:
texlive-fonts-recommended
- TeX Live: Recommended fonts
-
- adep:
bwa
- Burrows-Wheeler Aligner
-
- adep:
clustalo
- General-purpose multiple sequence alignment program for proteins
-
- adep:
clustalw
- global multiple nucleotide or peptide sequence alignment
-
- adep:
dialign
- Segment-based multiple sequence alignment
-
- adep:
dssp
(>= 4.0.0)
- protein secondary structure assignment based on 3D structure
-
- adep:
emboss
- European molecular biology open software suite
-
- adep:
fasttree
- phylogenetic trees from alignments of nucleotide or protein sequences
-
- adep:
mafft
- Multiple alignment program for amino acid or nucleotide sequences
-
- adep:
muscle
- Multiple alignment program of protein sequences
-
- adep:
ncbi-blast+
(>= 2.10.1-3)
- next generation suite of BLAST sequence search tools
-
- adep:
phylip
- package of programs for inferring phylogenies
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- adep:
phyml
[any-amd64 any-i386]
- Phylogenetic estimation using Maximum Likelihood
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- adep:
prank
- Probabilistic Alignment Kit for DNA, codon and amino-acid sequences
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- adep:
probcons
- PROBabilistic CONSistency-based multiple sequence alignment
-
- adep:
python3-networkx
- tool to create, manipulate and study complex networks (Python3)
-
- adep:
python3-mysqldb
- Python interface to MySQL
-
- adep:
python3-matplotlib
- Python based plotting system in a style similar to Matlab (Python 3)
-
- adep:
python3-mmtf
- binary encoding of biological structures (Python 3)
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- adep:
python3-pil
- Python Imaging Library (Python3)
-
- adep:
python3-rdflib
- Python 3 library containing an RDF triple store and RDF parsers/serializers
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- adep:
python3-renderpm
- python low level render interface
-
- adep:
python3-psycopg2
- Python 3 module for PostgreSQL
-
- adep:
python3-pygments
- syntax highlighting package written in Python 3
-
- adep:
python3-scipy
- scientific tools for Python 3
-
- adep:
python3-setuptools
- Python3 Distutils Enhancements
-
- adep:
python3-unittest2
- backport of the enhanced unittest testing framework - Python 3.x
-
- adep:
raxml
[any-amd64 any-i386]
- Randomized Axelerated Maximum Likelihood of phylogenetic trees
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- adep:
samtools
- processing sequence alignments in SAM, BAM and CRAM formats
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- adep:
t-coffee
- Multiple Sequence Alignment
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- adep:
wise
- comparison of biopolymers, like DNA and protein sequences
